 |
Job Description | P0A9Q7 | Confidence | 74.93% | Date | Thu Jan 5 11:11:00 GMT 2012 |
Rank | 187 | Aligned Residues | 71 |
% Identity | 17% | Template | d1ybha1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 2.50 |
|
 |
  |   |
466 | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
|
|
|
. | . | . | . | . | . | . | 520 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 530 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | P | I | A | L | D | E | V | I | T | D | G | H | K | R | A | L | I | V | T | D | R | F | L | F | N | N | G | Y | A | D | Q | I | T | S | V | L | K | A | A | G | V | E | T | E | V | . |
. |
. |
. |
F | F | E | V | E | A | D | P | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | I | V | R | K | G | A | E | L | A |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
| . | . | . | . |
|   |   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   | . | . |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   | . | . |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   | . | . |
Template Sequence |   |
H | L | E | Q | I | V | R | L | I | S | E | . |
. |
S | K | K | P | V | L | Y | V | G | G | G | C | L | N | S | S | . |
. |
D | E | L | G | R | F | V | E | L | T | G | I | P | V | A | S | T | L | M | G | L | G | S | Y | P | D | D | E | L | S | L | H | M | L | G | M | H | G | T | V | Y | A | N | Y | A | V | E | . |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |
| S | S |  |  |  |  |  |
| G | G | G | T | T |
|  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| T | T | T | T | T | S |
|
|
|
| T | T |  |  |  |  |
| S | T | T | S |
|  |  |  |  |  |  |  |  | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |
|  |  |  |  |
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
288 | . | 290 | . | . | . | . | . | . | . | . | |
|
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | |
|
. | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | |
|
  |
  |   |
533 | . | . | . | . | . | . | 540 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | F | K | P | D | V | I | I | A | L | G | G |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
. |
. |
. |
H | S | D | L | L | L | A | F | G | V |
Template Known Secondary structure |   |
. | . | . |  |
| S |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
. | . | . |  |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
363 | . | . | . | . | . | . | 370 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|