 |
Job Description | P0A9Q7 | Confidence | 93.16% | Date | Thu Jan 5 11:11:00 GMT 2012 |
Rank | 94 | Aligned Residues | 96 |
% Identity | 19% | Template | d1vh3a_ |
SCOP info | Nucleotide-diphospho-sugar transferases
| Nucleotide-diphospho-sugar transferases
| Cytidylytransferase
|
Resolution | 2.70 |
|
 |
  |   |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Y | F | R | R | G | S | L | P | I | A | L | D | E | V | I | T | D | G | H | K | R | A | L | I | V | T | D | R | F | L | F | N | N | G | Y | A | D | Q | I | T | S | V | L | K | A | A | G | V | E | T | E | V | F | F | E | V | E | A | D | P | T | L | S | I | V | R | K | G | A | E | L | A | N | S | F | K | P | D | V |
Query Conservation |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
I | I | P | A | R | P | X | I | Q | H | V | F | E | K | A | L | Q | S | G | A | S | R | V | I | I | A | T | D | N | . |
. |
. |
. |
. |
. |
. |
. |
E | N | V | A | D | V | A | K | S | F | G | A | E | V | C | X | T | S | V | N | H | N | S | G | T | E | R | . |
L | A | E | V | V | E | K | L | A | I | P | D | N | E | I |
Template Known Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  | S |
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| S |
|
| S | S |  |  |  |  | . |  |  |  |  |  |  |  | T | T |
|
| T | T | S |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
540 | . | . | . | . | . | . | . | . | . | |
|
|
|
550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | A | L | G | G | G | S | P | M | . |
. |
. |
. |
D | A | A | K | I | M | W | V | M | Y | E | H | P | E | T |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
| . | . | . | . |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | V | N | I | Q | G | D | E | P | L | I | P | P | V | I | V | R | Q | V | A | D | N | L | A | K | F | N | V | N |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|