 |
Job Description | P0A9Q7 | Confidence | 82.50% | Date | Thu Jan 5 11:11:00 GMT 2012 |
Rank | 155 | Aligned Residues | 72 |
% Identity | 18% | Template | d1pvda1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 2.30 |
|
 |
  |   |
466 | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | |
. | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | P | I | A | L | D | E | V | I | T | D | G | H | K | R | A | L | I | V | T | D | R | F | L | F | N | N | G | Y | A | D | Q | I | T | S | V | L | K | A | A | G | V | E | T | E | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | F | E | V | . |
E | A | D | P | T | L | S | I | V | R | K | G | A | E |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
| . |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   | . | . |
|
|   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
V | I | D | T | I | L | A | L | V | K | D | . |
. |
A | K | N | P | V | I | L | A | D | A | C | C | S | R | H | D | V | K | A | E | T | K | K | L | I | D | L | T | Q | F | P | A | F | V | T | P | M | G | K | G | S | I | S | E | Q | H | P | R | Y | G | G | V | Y | V | G | T | L | S | K | P | E | V | K | E | A | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |
| S | S |  |  |  |  |  |
| G | G | G | T | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| G | G | G | T | T | S | S |
| T | T | S | T | T |  |  |  |  |
|
| S | T | T | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | |
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
  |
  |   |
531 | . | . | . | . | . | . | . | . | 540 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | N | S | F | K | P | D | V | I | I | A | L | G |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |
|
|
|
|
|   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
S | A | D | L | I | L | S | V | G |
Template Known Secondary structure |   |
. | . | . | . | . | T |
| S |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
. | . | . | . | . |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
278 | . | 280 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|