Job Description P0A9Q7 Confidence 41.81% Date Thu Jan 5 11:11:00 GMT 2012 Rank 363 Aligned Residues 186 % Identity 15% Template d1jdpa_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.00

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.						.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.														.	.	.	.	.																				.	.	.
Query SS confidence																		.	.														.	.	.	.	.																				.	.	.
Query Sequence		F	E	D	A	V	E	K	A	E	K	L	V	A	M	G	G	.	.	I	G	H	T	S	C	L	Y	T	D	Q	D	N	.	.	.	.	.	Q	P	A	R	V	S	Y	F	G	Q	K	M	K	T	A	R	I	L	I	.	.	.	N	T	P	A	S	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T
Query Conservation																		.	.														.	.	.	.	.																				.	.	.
Alig confidence																		.	.														.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		V	R	P	A	I	E	Y	A	L	R	S	V	E	G	R	L	L	P	P	G	T	R	F	Q	V	A	Y	E	D	S	D	C	G	N	R	A	L	F	S	L	V	D	R	V	A	A	A	R	G	A	K	P	D	L	I	L	G	P	V	C	E	Y	A	A	A	P	V	A	R	L	A	S	H	W	D	L	P	M	L	S
Template Known Secondary structure																		S		T	T											T	T	S	T													T	T	T				S							S															T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.				.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		L	G	C	G	S	W	G	G	N	S	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V	A	K	R	A	E	N	M	L	W	H	K	L	P	K	S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	.	.	.	T	D	R	F	L	F	N	N	G	Y
Query Conservation																																																																					.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.														.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Sequence		A	G	A	L	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	H	K	D	S	E	Y	S	H	L	T	R	V	A	P	A	Y	A	K	M	G	E	M	M	L	A	.	.	.	L	F	R	H	H	H	W	S	R	A	A	L	V	Y	S	D	D	K	L	E	R	N	C	Y	F	T
Template Known Secondary structure		S				S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		T	T	T	T	T	T	T					S													.	.	.						T												S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template SS confidence
		112	.	.	.	.	.	.																		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		L	E	G	V	H	E	V	F	Q	E	E	G	L	H	T	S	I	Y	S	F	D	E	T	K	D	L	D	.	.	L	E	D	I	V	R	N	I	Q	A	S	E	R	V	V	I	M	C	A	S	S	D	T	I	R	S	I	M	L	V	A	H
Template Known Secondary structure													T										T	T	S				.	.													S						S
Template Predicted Secondary structure																													.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions