Job Description P0A9Q7 Confidence 95.81% Date Thu Jan 5 11:11:00 GMT 2012 Rank 81 Aligned Residues 191 % Identity 10% Template d1ewka_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.20

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.				.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																	.	.	.												.	.																										.	.	.
Query SS confidence																	.	.	.												.	.																										.	.	.
Query Sequence		D	A	V	E	K	A	E	K	L	V	A	M	G	G	I	.	.	.	G	H	T	S	C	L	Y	T	D	Q	D	.	.	N	Q	P	A	R	V	S	Y	F	G	Q	K	M	K	T	A	R	I	L	I	N	T	P	A	S	.	.	.	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T	L	G	C	G
Query Conservation																	.	.	.												.	.																										.	.	.
Alig confidence																	.	.	.												.	.																										.	.	.
Template Conservation
Template Sequence		E	A	M	F	H	T	L	D	K	I	N	A	D	P	V	L	L	P	N	I	T	L	G	S	E	I	R	D	S	C	W	H	S	S	V	A	L	E	Q	S	I	E	F	I	R	K	P	I	A	G	V	I	G	P	G	S	S	S	V	A	I	Q	V	Q	N	L	L	Q	L	F	D	I	P	Q	I	A	Y	S	A	T
Template Known Secondary structure															S	S	S	S	T	T											T	T																								S	S												G	G	G	T						S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	G	G	N	S	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V	A	K	R	A	E	N	M	L	W	H	K	L	P	K	S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	L	S	D	K	T	L	Y	K	Y	F	L	R	V	V	P	S	D	T	L	Q	A	R	A	M	L	D	.	.	.	I	V	K	R	Y	N	W	T	Y	V	S	A	V	H	T	E	G	N	Y	G	E	S	G	M	D	A	F	K	E	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G		T	T	T		T	T				S	S													.	.	.					T	T										S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
		189																			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	Q	E	G	L	C	I	A	H	S	D	K	I	Y	S	N	A	G	E	K	S	F	D	R	L	L	R	K	L	R	E	R	L	P	K	A	R	V	V	V	C	F	C	E	G	M	T	V	R	G	L	L	S	A	M	R	R	L	G
Template Known Secondary structure						T											T	T															T	T	T	T	T																								T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions