Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 58 Aligned Residues 327 % Identity 22% Template c3uhjE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:probable glycerol dehydrogenase; PDBTitle: crystal structure of a probable glycerol dehydrogenase from2 sinorhizobium meliloti 1021 Resolution 2.34 Å

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		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	L	P	K	S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N
Query Conservation
Alig confidence																											.															.	.	.	.	.	.	.	.	.
Template Conservation																											.															.	.	.	.	.	.	.	.	.
Template Sequence		F	G	G	P	N	K	Y	I	Q	R	A	G	E	I	D	K	L	A	A	Y	L	A	P	L	G	.	K	R	A	L	V	L	I	D	R	V	L	F	D	A	.	.	.	.	.	.	.	.	.	L	S	E	R	I	S	L	D	I	R	F	E	R	F	G	G	E	C	C	T	S	E	I	E	R	V	R	K	V	A	I
Template Known Secondary structure						S						T	T	G	G	G	G						T	T	T		.	S								G	G	G				.	.	.	.	.	.	.	.	.																S
Template Predicted Secondary structure																											.															.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P	E	T	H	F	E	E	L	A	L	R	F	M	D	I	R	K	R	I	Y	K	F	P	K	M	G	V	K	A	K	M	I	A	V	T	T	T	S	G	T	G	S	E	V	T	P	F	A	V	V	T	D
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	G	S	D	I	L	V	G	V	G	G	G	K	T	A	D	T	A	K	I	V	A	I	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	R	I	V	I	A	P	T	I	A	S	T	D	A	P	C	S	A	I	A	V	R	Y	T
Template Known Secondary structure				T		S						S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S				S	T	T	T		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																														130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.											.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	T	G	Q	K	Y	P	L	A	D	Y	A	L	T	P	D	M	A	I	V	D	A	N	L	V	M	D	M	P	K	S	L	C	A	F	G	G	L	D	A	V	T	H	A	M	E	A	Y	V	S	V	L	A	.	.	.	.	.	.	.	.	.	.	S	E	F	S	D	G	Q	A	L	Q	A	L	K	L	L	K
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence			.																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		E	.	H	G	V	Y	E	E	A	L	R	L	P	R	N	P	D	A	V	V	V	D	S	A	L	V	A	A	A	P	A	R	F	L	V	A	G	I	G	D	A	L	S	T	W	F	E	A	R	S	N	I	E	S	R	T	D	N	A	G	G	F	P	A	T	E	A	G	X	A	I	A	R	H	C	Q	D	V	L	T
Template Known Secondary structure		T	.	T	S									S	S			S											T	S													T													T
Template Predicted Secondary structure			.
Template SS confidence
		155		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		684	.	.	.	.	.	690	.				.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.				.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																									.	.	.
Query SS confidence										.	.	.																																									.	.	.
Query Sequence		E	Y	L	P	A	S	Y	H	.	.	.	E	G	S	K	N	P	V	A	R	E	R	V	H	S	A	A	T	I	A	G	I	A	F	A	N	A	F	L	G	V	C	H	S	M	A	H	K	L	G	S	.	.	.	Q	F	H	I	P	H	G	L	A	N	A	L	L	I	C	N	V	I	R	Y	N	A	N	D	N	P
Query Conservation										.	.	.																																									.	.	.
Alig confidence										.	.	.																																									.	.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		R	D	A	V	K	A	K	I	A	V	E	A	G	L	L	T	P	A	V	E	N	I	I	E	A	N	T	L	L	S	G	L	G	F	E	N	C	G	C	S	A	A	H	G	I	H	D	G	L	T	V	L	E	E	V	H	G	Y	F	H	G	E	K	V	A	F	G	T	L	C	L	L	X	L	E	N	R	.	.	.
Template Known Secondary structure													T	T														T																							T	T	S	G	G	G	T	T	S																	T	T		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	Q	T	A	F	S	Q	Y	D	R	P	Q	A	R	R	R	Y	A	E	I	A	D	H	L	G	L	S	A	P	G	D	R	T	A	A	K	I	E	K	L	L	A	W	L	E	T	L	K	A	E	L	G	I	P	K	S	I	R	E	A	G	V	Q	E	A	D	F	L	A	N	V	D	K	L	S	E	D	A	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	A	E	I	E	A	X	I	R	F	C	R	S	V	G	L	P	T	K	L	A	D	L	G	I	V	D	D	V	.	P	A	K	I	G	R	V	A	E	A	A	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T				S	G	G	G	G	T			S	S		.												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
																																							313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.
		838	.	840	.	.	.	.	.		.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		D	D	Q	C	T	G	A	N	.	P	R	Y	P	L	I	S	E	L	K	Q	I	L	L	D	T
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		R	P	G	N	I	I	Y	A	T	P	V	T	I	T	V	P	A	V	R	D	A	I	L	A	L
Template Known Secondary structure		S	T	T		G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions