Job Description P0A9Q7 Confidence 42.90% Date Thu Jan 5 11:11:00 GMT 2012 Rank 355 Aligned Residues 153 % Identity 7% Template c3om1A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor gluk5 (ka2); PDBTitle: crystal structure of the gluk5 (ka2) atd dimer at 1.7 angstrom2 resolution Resolution 1.68 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	R	A	E	N	M	L	W	H	K	L	P	K	S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S
Query Conservation
Alig confidence																						.	.	.	.																																																				.	.	.	.	.
Template Conservation																						.	.	.	.																																																				.	.	.	.	.
Template Sequence		R	L	Q	Y	L	R	F	A	S	V	S	L	Y	P	S	N	E	D	V	S	.	.	.	.	L	A	V	S	R	I	L	K	S	F	N	Y	P	S	A	S	L	I	C	A	K	A	E	C	L	L	R	L	E	E	L	V	R	G	F	L	I	S	K	E	T	L	S	V	R	M	L	D	D	R	D	.	.	.	.	.
Template Known Secondary structure				G	G	G	G	G	G					S								.	.	.	.										T	T	S								S	S	T	T					T										S	S	S												.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																																																				.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P	E	T	H	F	E	E	L	A	L	R	F	M	D	I	R	K	R	I	Y	K	F	P	K	M	G	V	K	A	K	M	I	A	V	T	T	T	S	G	T	G	S
Query Conservation
Alig confidence		.																					.	.
Template Conservation		.																					.	.
Template Sequence		.	P	T	P	L	L	K	E	I	R	D	D	K	V	S	T	I	I	I	D	A	.	.	N	A	S	I	S	H	L	V	L	R	K	A	S	E	L	G	M	T	S	A	F	Y	K	Y	I	L	T	T	M	D	F	P	I	L	H	L	D	G	I	V	E	D	S	S	N	I	L	G	F	S	M	F	N	T	S	H	P
Template Known Secondary structure		.												T								S	.	.															T	T	T	T	S	T	T								T	T	G	G	G				T	T	T			T	T											T	T	S	T
Template Predicted Secondary structure		.																					.	.
Template SS confidence
			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		604	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	T	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	P	E	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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