Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 62 Aligned Residues 328 % Identity 19% Template c3okfA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase2 (arob) from vibrio cholerae Resolution 2.50 Å

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		452	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510			.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																																				.	.
Query SS confidence										.	.	.																																																				.	.
Query Sequence		L	W	H	K	L	P	K	S	.	.	.	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	.	.	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R
Query Conservation										.	.	.																																																				.	.
Alig confidence										.	.	.																				.															.																	.	.
Template Conservation																																.															.
Template Sequence		I	T	V	N	L	G	E	R	S	Y	P	I	S	I	G	A	G	L	F	A	N	P	A	L	L	S	L	S	A	K	.	Q	K	V	V	I	V	T	N	H	T	V	A	P	L	.	Y	A	P	A	I	I	S	L	L	D	H	I	G	C	Q	H	A	L	L	E	L	P	D	G	E	Q	Y	K	T	L	E	T	F	N
Template Known Secondary structure							G	G	G								T	T	G	G	G		G	G	G	G				T	T	.									T	T	T				.													T										S	S	G	G	G		B
Template Predicted Secondary structure																																.															.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.				.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.			.	600	.
Predicted Secondary structure													.	.	.																																																														.	.
Query SS confidence													.	.	.																																																														.	.
Query Sequence		K	G	A	E	L	A	N	S	F	K	P	.	.	.	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P	E	T	H	F	E	E	L	A	L	R	F	M	D	I	R	K	R	I	Y	K	F	P	K	M	G	V	K	A	K	M	I	A	V	T	T	T	.	.	S	G	T
Query Conservation													.	.	.																																																														.	.
Alig confidence													.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	M	S	F	L	L	E	H	N	Y	S	R	D	V	V	V	I	A	L	G	G	G	V	I	G	D	L	V	G	F	A	A	A	C	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	G	V	D	F	I	Q	I	P	T	T	L	L	S	Q	V
Template Known Secondary structure										T	T			T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																												.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	V	T	P	F	A	V	V	T	D	D	A	T	G	Q	K	Y	P	L	A	D	Y	A	L	T	P	D	M	A	I	V	D	A	N	L	V	M	D	M	P	K	S	L	C	A	F	G	G	L	D	A	V	T	H	A	M	E	A	Y	V	S	V	L	A	S	E	F	S	D	G	Q	A	L	Q	A	L	K	L
Query Conservation
Alig confidence																										.	.	.																																					.	.
Template Conservation																										.	.	.																																					.	.
Template Sequence		D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	.	.	.	P	K	A	V	V	I	D	T	D	C	L	T	T	L	P	A	R	E	F	A	A	G	M	A	E	V	I	K	Y	G	I	I	Y	D	S	A	.	.	F	F	D	W	L	E	A	Q	M	E	A	L	Y	A	L
Template Known Secondary structure			T	S	S	S								T	T											.	.	.		S						G	G	G	G	G	G	S																			T				.	.														T	T
Template Predicted Secondary structure																										.	.	.																																					.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	Y	L	P	A	S	Y	H	E	G	S	K	N	P	V	A	R	E	R	V	H	S	A	A	T	I	A	G	I	A	F	A	N	A	F	L	G	V	C	H	S	M	A	H	K	L	G	S	Q	F	H	I	P	H	G	L	A	N	A	L	L	I	C	N	V	I	R	Y	N	A	N	D	N	P	T	K	Q	T
Query Conservation
Alig confidence													.	.	.																																	.																									.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																																	.																									.	.	.	.	.	.	.	.	.
Template Sequence		D	E	Q	A	L	T	Y	A	I	A	R	.	.	.	C	C	Q	I	K	A	E	V	V	A	Q	D	E	K	G	I	R	A	L	L	N	L	G	H	T	F	G	H	A	I	E	A	.	H	M	G	Y	G	N	W	L	H	G	E	A	V	S	A	G	T	V	M	A	A	K	T	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													.	.	.																G	G	G	G	G	G	T	T										.				T	T	T	S																		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.																																	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		762	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	S	Q	Y	D	R	P	Q	A	R	R	R	Y	A	E	I	A	D	H	L	G	L	S	A	P	G	D	R	T	A	A	K	I	E	K	L	L	A	W	L	E	T	L	K	A	E	L	G	I	P	K	S	I	R	E	A	G	V	Q	E	A	D	F	L	A	N	V	D	K	L	S	E	D	A	F	D	D	Q	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.																								.							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.																								.							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	Q	G	L	I	.	.	.	.	.	.	.	.	.	D	A	S	Q	F	E	R	I	L	A	I	L	K	K	A	H	L	P	V	R	T	P	E	.	N	M	T	F	A	D	.	.	.	.	.	.	.	F	M	Q	H	M	M	R	D	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S	.	.	.	.	.	.	.	.	.															T	T				S			T	.	T						.	.	.	.	.	.	.						T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.																								.							.	.	.	.	.	.	.
Template SS confidence
																				284	.	.	.	.	.										290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.								.	320	.	.	.	.	.	.	.	.
		842	.	.	.	.	.	.																.	850	.	.	.	.	.	.	.	.	.	860	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	A	N	P	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	I	S	E	L	K	Q	I	L	L	D	T
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	A	G	E	L	R	L	V	L	P	T	S	I	G	T	S	A	V	V	K	G	V	P	E	A	V	I	A	Q	A	I	E	Y	C
Template Known Secondary structure				T	T										T	T																				T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low