Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9Q7
Confidence53.60%DateThu Jan 5 11:11:00 GMT 2012
Rank281Aligned Residues148
% Identity13%Templatec3nxlD_
PDB info PDB header:lyaseChain: D: PDB Molecule:glucarate dehydratase; PDBTitle: crystal structure of glucarate dehydratase from burkholderia cepacia2 complexed with magnesium
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   448.450.........460.........470.........480.........490.........500.........510.........520 ....
Predicted Secondary structure 



























...
Query SS confidence 








































































. . .



Query Sequence  AENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADP. . . TLSI
Query Conservation        
  
  
 

 
 
  
   
   
    




      
    
   
   

   

  
  

...    
Alig confidence 
































...








...














.....




...



Template Conservation 
    





   
          
     

...

 

    ...      

   
 

..... 
 
   



 
Template Sequence  GHLLAYAEDPCGPEGGYSGREVXAEFRRATGIP. . . TATNXIATD. . . WRQXDHAVRLQAVDI. . . . . PLADPHFWTXQG
Template Known Secondary structure  TTT
SS
B

BTTB



...SSS

S...T

S.....B


Template Predicted Secondary structure 
















...






...



.....






Template SS confidence 















































































   273......280.........290.........300..... ....310.... .....320......... 330.........340.
 
   525....530.........540.........550.........560.........570.........580.........590.........600....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  VRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSE
Query Conservation 
            
 







 

 

 

                                  
 











Alig confidence 















































































Template Conservation    


 

    
    
      
  

  
  

 

                 
         
   

  





Template Sequence  SVRLAQLCRDWGLTWGSHSNNHFDVSLAXFTHAAAAAPGTITAIDTHWIWQEGDARLTREPLKIVGGQVAVPERPGLGIE
Template Known Secondary structure  T


B



S

T

S



B


BTTB
SBSS


TT

SSSBTS

Template Predicted Secondary structure 





































Template SS confidence 















































































   342.......350.........360.........370.........380.........390.........400.........410.........420.
 
   605.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  VT
Query Conservation   
Alig confidence 

Template Conservation 

Template Sequence  LD
Template Known Secondary structure  B
Template Predicted Secondary structure 
Template SS confidence 

   422.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions