Job Description P0A9Q7 Confidence 65.96% Date Thu Jan 5 11:11:00 GMT 2012 Rank 225 Aligned Residues 64 % Identity 27% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.				.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I	A	.	.	.	L	G	G	G	S	P	M	D	A	A	K	I	M	W
Query Conservation																																																																	.	.	.
Alig confidence													.	.	.	.																						.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation													.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	L	V	V	D	D	D	A	S	.	.	.	.	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	.	.	.	.	.	.	.	.	.	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R
Template Known Secondary structure									S				.	.	.	.												T	T									.	.	.	.	.	.	.	.	.	G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure													.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions