Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 45 Aligned Residues 419 % Identity 21% Template c3k2wD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:betaine-aldehyde dehydrogenase; PDBTitle: crystal structure of betaine-aldehyde dehydrogenase from2 pseudoalteromonas atlantica t6c Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	V	T	N	V	A	E	L	N	A	L	V	E	R	V	K	K	A	Q	R	E	Y	A	S	F	T	Q	E	Q	V	D	K	I	F	R	A	A	A	L	A	A	A	D	A	R	I	P	L	A	K	M	A	V	A	E	S	G	M	G	I	V	E	D	K	V	I	K	N	H	F	A	S	E	Y	I	Y	N	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	A	G	C	K	A	D	A	E	N	A	L	E	V	A	Q	A	A	Q	K	A	W	A	K	L	T	A	R	T	R	Q	N	M	L	R	T	F	A	N	K	I	R	E	N	K	H	I	L	A	P	M	L	V	A	E	Q	G	K	L	L	S	V	A	E	M	E	V	D	V	T	A	T	F	I	D	Y	G	C	D
Template Known Secondary structure																											S																			T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		81	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		K	D	E	K	T	C	G	.	.	V	L	S	E	D	D	T	F	G	T	I	T	I	A	E	P	I	G	I	I	C	G	I	V	P	T	T	N	P	T	S	T	A	I	F	K	S	L	I	S	L	K	T	R	N	A	I	I	F	S	P	H	P	R	A	K	D	A	T	N	K	A	A	D	I	V	L	Q	A	A	I
Query Conservation									.	.
Alig confidence									.	.																																																																						.	.
Template Conservation																																																																																.	.
Template Sequence		N	A	L	T	I	E	G	D	I	L	P	S	D	N	Q	D	E	K	I	Y	I	H	K	V	P	R	G	V	V	V	G	I	T	A	W	N	F	P	L	A	L	A	G	R	K	I	G	P	A	L	I	T	G	N	T	M	V	L	K	P	T	Q	E	T	P	L	A	T	T	E	L	G	R	I	A	K	E	A	.	.
Template Known Secondary structure		T	T	T	T									S	S	T	T											S								S	S	S															T	T									S	S	S														T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		A	A	G	A	P	K	D	L	I	G	W	I	D	Q	P	S	V	E	L	S	N	A	L	M	H	H	P	D	I	N	L	I	L	A	T	G	G	P	G	M	V	.	.	.	.	K	A	A	Y	S	S	G	K	P	A	I	G	V	G	A	G	N	T	P	V	V	I	D	E	T	A	D	I	K	R	A	V	A	S	V
Query Conservation																																											.	.	.	.
Alig confidence		.	.																																								.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	L	P	D	G	V	L	N	V	I	N	G	T	G	S	V	V	G	Q	T	L	C	E	S	P	I	T	K	M	I	T	M	T	G	S	T	V	A	G	K	Q	I	Y	K	T	S	A	E	Y	M	T	P	V	M	L	E	L	G	G	K	A	P	M	V	V	M	D	D	A	D	L	D	K	A	A	E	D	A
Template Known Secondary structure		.	.	T			T	T	T						S		T	T	T									T	T								S													T	T	T	T																	T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	S	K	T	F	D	N	G	V	I	C	A	S	E	Q	S	V	V	V	V	D	S	V	Y	D	A	V	R	E	R	F	A	T	H	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	Q	G	K	E	L	K	A	V	Q	D	V	I	L	K	N	G	A	L	N	A	A	I	V	G	Q
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	W	G	R	F	A	N	C	G	Q	V	C	T	C	V	E	R	L	Y	V	H	A	S	V	Y	D	E	F	M	A	K	F	L	P	L	V	K	G	L	K	V	G	D	P	M	D	A	D	S	Q	M	G	P	K	C	N	Q	R	E	I	D	N	I	D	H	I	V	H	E	A	I	K	Q	G	A	T	V	A	T	G
Template Known Secondary structure							G	G	G	G		S	T	T	S								G	G	G														T			B			T	T	S	T	T		S	B				S																			T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		P	A	Y	K	I	A	E	L	A	G	F	S	V	P	E	N	T	K	I	L	I	G	E	V	T	V	V	D	E	S	E	P	F	A	H	E	K	.	L	S	P	T	L	A	M	Y	R	A	K	D	F	E	D	A	V	E	K	A	E	K	L	V	A	M	G	G	I	G	H	T	S	C	L	Y	T	D	Q	D	N	Q
Query Conservation																																							.
Alig confidence										.	.	.	.																										.																							.	.	.	.														.	.	.
Template Conservation										.	.	.	.																																																	.	.	.	.														.	.	.
Template Sequence		G	K	T	A	T	V	E	G	.	.	.	.	F	E	G	G	C	W	Y	E	P	T	V	L	V	D	V	K	Q	D	N	I	V	V	H	E	E	T	F	G	P	I	L	P	I	V	K	V	S	S	M	E	Q	A	I	E	F	C	N	D	.	.	.	.	S	I	Y	G	L	S	A	Y	V	H	T	Q	S	.	.	.
Template Known Secondary structure			S	B				T	T	.	.	.	.			S	S			B							S			T	T	S	G	G	G	T	S				S	S								S											S	.	.	.	.	S	S			S									.	.	.
Template Predicted Secondary structure										.	.	.	.																																																	.	.	.	.														.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	R	V	S	Y	F	G	Q	K	M	K	T	A	R	I	L	I	N	T	P	A	S	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T	L	G	C	G	S	W	G	G	N	S	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V
Query Conservation
Alig confidence																									.									.	.	.	.	.	.	.	.	.
Template Conservation																									.									.	.	.	.	.	.	.	.	.
Template Sequence		F	A	N	I	N	Q	A	I	S	D	L	E	V	G	E	V	Y	I	N	R	G	M	G	.	E	Q	H	Q	G	F	H	N	.	.	.	.	.	.	.	.	.	G	W	K	Q	S	G	F	G	G	E	D	G	K	F	G	L	E	Q	Y	L	E	K	K	T	V
Template Known Secondary structure														S	S					S			S		.			T	T	S		B		.	.	.	.	.	.	.	.	.				T	T			S		B	S							T	T
Template Predicted Secondary structure																									.									.	.	.	.	.	.	.	.	.
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.										.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.