Job Description P0A9Q7 Confidence 74.14% Date Thu Jan 5 11:11:00 GMT 2012 Rank 191 Aligned Residues 87 % Identity 17% Template c3jpyA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit epsilon-2; PDBTitle: crystal structure of the zinc-bound amino terminal domain of the nmda2 receptor subunit nr2b Resolution 3.21 Å

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		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M
Query Conservation
Alig confidence																																																								.	.	.	.																	.	.
Template Conservation																																																								.	.	.	.																	.	.
Template Sequence		M	L	N	I	M	E	E	Y	D	W	Y	I	F	S	I	V	T	T	Y	F	P	G	Y	Q	D	F	V	N	K	I	R	S	T	I	E	N	S	F	V	G	W	E	L	E	E	V	L	L	L	D	M	S	S	K	.	.	.	.	I	Q	N	Q	L	K	K	L	Q	S	P	I	I	L	L	Y	.	.	C	T	K	E
Template Known Secondary structure									T	T										S	S	T	T														T		S	S															T	.	.	.	.						T	T				S						.	.	S
Template Predicted Secondary structure																																																								.	.	.	.																	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230
		550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	K	I	M	W	V	M	Y	E	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	T	Y	I	F	E	V	A	N	S	V	G
Template Known Secondary structure												T	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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