Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9Q7
Confidence93.63%DateThu Jan 5 11:11:00 GMT 2012
Rank90Aligned Residues113
% Identity13%Templatec3i45A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of putative twin-arginine translocation pathway2 signal protein from rhodospirillum rubrum atcc 11170
Resolution1.36 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450.........460.........470.........480.........490.........500.........510.........520..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  TVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTL
Query Conservation   
  
      
  
  
 

 
 
  
   
   
    




      
    
   
   

   

  
  

  
Alig confidence 



















...
























































Template Conservation                      ...                   
      
              
  
            
Template Sequence  ALTWEKGNRYTYRLRPSTYM. . . QAAMLAAEAAKLPITRWATIAPNYEYGQSAVARFKELLLAARPEVTFVAEQWPALYK
Template Known Secondary structure  GGTTTT

TT
S

...TTSS



SS
TT



TT
Template Predicted Secondary structure 













...














Template SS confidence 















































































   109110.........120........ .130.........140.........150.........160.........170.........180.....
 
   523......530.........540.........550.........560
Predicted Secondary structure 








Query SS confidence 





































Query Sequence  SIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYE
Query Conservation    
            
 







 

 

 

    
Alig confidence 
























..










Template Conservation                   
       ..           
Template Sequence  LDAGPTVQALQQAEPEGLFNVLFGA. . DLPKFVREGRV
Template Known Secondary structure 

T

S


TT..
Template Predicted Secondary structure 






..
Template SS confidence 





































   186...190.........200.........210 .........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions