Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 8 Aligned Residues 411 % Identity 18% Template c3hazA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:proline dehydrogenase; PDBTitle: crystal structure of bifunctional proline utilization a2 (puta) protein Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	V	T	N	V	A	E	L	N	A	L	V	E	R	V	K	K	A	Q	R	E	Y	A	S	F	T	Q	E	Q	V	D	K	I	F	R	A	A	A	L	A	A	A	D	A	R	I	P	L	A	K	M	A	V	A	E	S	G	M	G	I	V	E	D	K	V	I	K	N	H	F	A	S	E	Y	I	Y	N	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	D	A	T	P	D	Q	A	H	A	A	V	A	A	A	R	A	G	F	A	G	W	S	R	T	P	A	G	I	R	A	A	A	L	E	Q	A	A	H	L	L	E	S	R	S	A	H	F	I	A	L	L	Q	R	E	G	G	K	T	L	D	D	A	L	S	E	L	R	E	A	A	D	F	C	R	Y	Y	A	A
Template Known Secondary structure																										T	S																			T											T	T
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
		81	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		K	D	E	K	T	C	G	.	.	.	V	L	S	E	D	D	T	F	G	T	I	T	I	A	E	P	I	G	I	I	C	G	I	V	P	T	T	N	P	T	S	T	A	I	F	K	S	L	I	S	L	K	T	R	N	A	I	I	F	S	P	H	P	R	A	K	D	A	T	N	K	A	A	D	I	V	L	Q	A	A
Query Conservation									.	.	.
Alig confidence									.	.	.																																																																						.
Template Conservation																																																																																	.
Template Sequence		Q	G	R	K	L	F	G	S	E	T	A	M	P	G	P	T	G	E	S	N	A	L	T	M	R	G	R	G	V	F	V	A	I	S	P	W	N	F	P	L	A	I	F	L	G	Q	V	T	A	A	L	M	A	G	N	S	V	V	A	K	P	A	E	Q	T	P	R	I	A	R	E	A	V	A	L	L	H	E	A	.
Template Known Secondary structure								S	S								T	T											S								S	S	S	T	T													T	T									T	T																.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		I	A	A	G	A	P	K	D	L	I	G	W	I	D	Q	P	S	V	E	L	S	N	A	L	M	H	H	P	D	I	N	L	I	L	A	T	G	G	P	G	M	V	K	A	A	Y	S	S	.	.	.	.	.	.	.	G	K	P	A	I	G	V	G	A	G	N	T	P	V	V	I	D	E	T	A	D	I	K	R	A
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence		.	.	.															.																															.	.	.	.	.	.	.
Template Conservation		.	.	.															.
Template Sequence		.	.	.	G	I	P	K	S	A	L	Y	L	V	T	G	D	G	.	R	I	G	A	A	L	T	A	H	P	D	I	A	G	V	V	F	T	G	S	T	E	V	A	R	S	I	N	R	A	L	A	A	K	D	G	P	I	V	P	L	I	A	E	T	G	G	I	N	A	M	I	A	D	A	T	A	L	P	E	Q	V
Template Known Secondary structure		.	.	.	T			T	T	T									.										T	T								S															S	S	S																			T	T	S
Template Predicted Secondary structure		.	.	.															.
Template SS confidence
					701	.	.	.	.	.	.	.	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	S	V	L	M	S	K	T	F	D	N	G	V	I	C	A	S	E	Q	S	V	V	V	V	D	S	V	Y	D	A	V	R	E	R	F	A	T	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	L	L	Q	G	K	E	L	K	A	V	Q	D	V	I	L	K	N	G	A	L	N	A	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	D	V	V	T	S	A	F	R	S	A	G	Q	R	C	S	A	L	R	L	L	F	V	Q	E	D	V	A	D	R	M	I	E	M	V	A	G	A	A	R	E	L	K	I	G	D	P	S	D	V	A	T	H	V	G	P	V	I	D	V	E	A	K	Q	R	L	D	A	H	I	A	R	M	K	T	E	A	R	L
Template Known Secondary structure											G	G	G	G		S	T	T																									T			B	S		T	T	S	T	T		S	B				S																			S
Template Predicted Secondary structure
Template SS confidence
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		I	V	G	Q	P	A	Y	K	I	A	E	L	A	G	F	S	V	P	E	N	T	K	I	L	I	G	E	V	T	V	V	D	E	S	E	P	F	A	H	E	K	L	S	P	T	L	A	M	Y	R	A	.	.	K	D	F	E	D	A	V	E	K	A	E	K	L	V	A	M	G	G	I	G	H	T	S	C	L	Y	T
Query Conservation																																																					.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																				.																.	.													.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.																				.																														.	.	.	.
Template Sequence		H	F	A	G	P	.	.	.	.	.	.	.	.	.	.	.	A	P	E	G	C	F	V	A	P	H	I	F	E	L	T	E	A	G	Q	.	L	T	E	E	V	F	G	P	I	L	H	V	V	R	Y	R	P	E	N	L	E	R	V	L	R	A	I	E	R	.	.	.	.	T	G	Y	G	L	T	L	G	V	H	S
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.			S	S	S										S	S	G	G	G	.			S				S	S									G	G	G											.	.	.	.	T				S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																				.																														.	.	.	.
Template SS confidence
		857	.	.	860	.												.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880		.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.					910	.	.	.	.	.	.	.	.	.	920
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																																		.								.
Query SS confidence																																																		.								.
Query Sequence		D	Q	D	N	Q	P	A	R	V	S	Y	F	G	Q	K	M	K	T	A	R	I	L	I	N	T	P	A	S	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T	L	G	C	.	G	S	W	G	G	N	S	.	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V
Query Conservation																																																		.								.
Alig confidence													.	.	.															.	.	.	.		.	.	.	.	.											.								.
Template Conservation													.	.	.															.	.	.	.		.	.	.	.	.
Template Sequence		R	I	D	D	S	I	E	A	I	I	D	.	.	.	R	V	Q	V	G	N	I	Y	V	N	R	N	M	I	.	.	.	.	G	.	.	.	.	.	A	V	V	G	V	Q	P	F	G	G	N	G	L	S	G	T	G	P	K	A	G	G	P	H	Y	L	A	R	F	A	T	E	Q	T	V
Template Known Secondary structure		S											.	.	.					S					S	S		S		.	.	.	.		.	.	.	.	.			T	T	T	S		B				G	G	G	B					B	T	S	T	T	S	G	G	G	G
Template Predicted Secondary structure													.	.	.															.	.	.	.		.	.	.	.	.
Template SS confidence
		921	.	.	.	.	.	.	.	.	930	.				.	.	.	.	.	.	.	.	940	.	.	.	.	.					.						.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.