Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9Q7
Confidence56.04%DateThu Jan 5 11:11:00 GMT 2012
Rank266Aligned Residues80
% Identity25%Templatec3gl9B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   479480.........490.........500.........510.........520.........530.........540.... .....550......
Predicted Secondary structure 





















..


Query SS confidence 

































































. .











Query Sequence  HKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALG. . GGSPMDAAKIMW
Query Conservation      




      
    
   
   

   

  
  

    
            
 




..


 

 

 

Alig confidence 











....




















.........



















..











Template Conservation 
 






   ....    
   
   
  
     .........  

         
 

        
      

Template Sequence  SKKVLLVDDSAV. . . . LRKIVSFNLKKEGYEVIEAEN. . . . . . . . . GQIALEKLSEFTPDLIVLIMMPVMDGFTVLKKLQ
Template Known Secondary structure 


S
....TT
SS.........TT


S



SSS
Template Predicted Secondary structure 




....




.........
















Template SS confidence 















































































   2.......10... ......20.........30.... .....40.........50.........60........
 
   557..560.........570.........580.........590.......
Predicted Secondary structure 



























Query SS confidence 








































Query Sequence  VMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTT
Query Conservation                                    
 




Alig confidence 
..........................













Template Conservation   ..........................        

  
 
Template Sequence  E. . . . . . . . . . . . . . . . . . . . . . . . . . KEEWKRIPVIVLTA
Template Known Secondary structure  ..........................
TTTTTS
S
Template Predicted Secondary structure 
..........................








Template SS confidence 








































   70 .........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions