Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 13 Aligned Residues 429 % Identity 19% Template c3ed6B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: 1.7 angstrom resolution crystal structure of betaine aldehyde2 dehydrogenase (betb) from staphylococcus aureus Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		M	A	V	T	N	V	A	E	L	N	A	L	V	E	R	V	K	K	A	Q	R	E	.	.	Y	A	S	F	T	Q	E	Q	V	D	K	I	F	R	A	A	A	L	A	A	A	D	A	R	I	P	L	A	K	M	A	V	A	E	S	G	M	G	I	V	E	D	K	V	I	K	N	H	F	A	S	E	Y	I	Y	N
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		V	S	E	G	T	K	E	D	A	E	R	A	I	L	A	A	R	R	A	F	E	S	G	E	W	S	Q	E	T	A	E	T	R	G	K	K	V	R	A	I	A	D	K	I	K	E	H	R	E	A	L	A	R	L	E	T	L	D	T	G	K	T	L	E	E	S	Y	A	D	M	D	D	I	H	N	V	F	M	Y	F
Template Known Secondary structure																								T	T	T	T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		A	Y	K	D	E	K	T	C	G	.	.	V	L	S	E	D	D	T	F	G	T	I	T	I	A	E	P	I	G	I	I	C	G	I	V	P	T	T	N	P	T	S	T	A	I	F	K	S	L	I	S	L	K	T	R	N	A	I	I	F	S	P	H	P	R	A	K	D	A	T	N	K	A	A	D	I	V	L	Q	A
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		A	G	L	A	D	K	D	G	G	E	M	I	D	S	P	I	P	D	T	E	S	K	I	V	K	E	P	V	G	V	V	T	Q	I	T	P	W	N	Y	P	L	L	Q	A	S	W	K	I	A	P	A	L	A	T	G	C	S	L	V	M	K	P	S	E	I	T	P	L	T	T	I	R	V	F	E	L	M	E	E	V
Template Known Secondary structure					T	T	S									S	S	T	T																			S	S	S																T									T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		A	I	A	A	G	A	P	K	D	L	I	G	W	I	D	Q	P	S	V	E	L	S	N	A	L	M	H	H	P	D	I	N	L	I	L	A	T	G	G	P	G	.	.	.	.	M	V	K	A	A	Y	S	S	G	K	P	A	I	G	V	G	A	G	N	T	P	V	V	I	D	E	T	A	D	I	K	R	A	V	A
Query Conservation																																											.	.	.	.
Alig confidence		.	.	.	.																																						.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	F	P	K	G	T	I	N	L	I	L	G	A	G	S	E	V	G	D	V	M	S	G	H	K	E	V	D	L	V	S	F	T	G	G	I	E	T	G	K	H	I	M	K	N	A	A	N	N	V	T	N	I	A	L	E	L	G	G	K	N	P	N	I	I	F	D	D	A	D	F	E	L	A	V	D
Template Known Secondary structure		.	.	.	.				T	T	S						S			T	T									T	T		S						S														T	T	T																	T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	L	M	S	K	T	F	D	N	G	V	I	C	A	S	E	Q	S	V	V	V	V	D	S	V	Y	D	A	V	R	E	R	F	A	T	H	G	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	Q	G	K	E	L	K	A	V	Q	D	V	I	L	K	N	G	A	L	N	A	A	I	V
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	L	N	G	G	Y	F	H	A	G	Q	V	C	S	A	G	S	R	I	L	V	Q	N	S	I	K	D	K	F	E	Q	A	L	I	D	R	V	K	K	I	K	L	G	N	G	F	D	A	D	T	E	M	G	P	V	I	S	T	E	H	R	N	K	I	E	S	Y	M	D	V	A	K	A	E	G	A	T	I	A
Template Known Secondary structure									G	G	G	G	T	S	T	T																								T	T			B			T	T	S	T	T		S	B				S																			T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	Q	P	A	Y	K	I	A	E	L	A	G	F	S	V	P	E	N	T	K	I	L	I	G	E	V	T	V	V	D	E	S	E	P	F	A	H	E	K	.	L	S	P	T	L	A	M	Y	R	A	K	D	F	E	D	A	V	E	K	A	E	K	L	V	A	M	G	G	I	G	H	T	S	C	L	Y	T	D	Q	D
Query Conservation																																									.
Alig confidence												.	.	.	.																										.																							.	.	.	.
Template Conservation												.	.	.	.																																																	.	.	.	.
Template Sequence		V	G	G	K	R	P	D	R	D	D	.	.	.	.	L	K	D	G	L	F	F	E	P	T	V	I	T	N	C	D	T	S	M	R	I	V	Q	E	E	V	F	G	P	V	V	T	V	E	G	F	E	T	E	Q	E	A	I	Q	L	A	N	D	.	.	.	.	S	I	Y	G	L	A	G	A	V	F	S	K	D	I
Template Known Secondary structure					S					T	T	.	.	.	.	T	T	T	S										S			T	T	S					S				S	S								S	S									T		.	.	.	.	S	S			S							S
Template Predicted Secondary structure												.	.	.	.																																																	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450			.	.	.
Predicted Secondary structure																																															.																														.	.
Query SS confidence																																															.																														.	.
Query Sequence		N	Q	P	A	R	V	S	Y	F	G	Q	K	M	K	T	A	R	I	L	I	N	T	P	A	S	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T	L	G	C	.	G	S	W	G	G	N	S	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V	A	K	R	A	E	N	.	.	M	L	W
Query Conservation																																															.																														.	.
Alig confidence							.	.	.																				.	.	.	.	.	.	.	.	.	.	.								.																														.	.
Template Conservation							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	Q	R	.	.	.	V	A	N	K	L	K	L	G	T	V	W	I	N	D	F	H	P	Y	F	.	.	.	.	.	.	.	.	.	.	.	A	Q	A	P	W	G	G	Y	K	Q	S	G	I	G	R	E	L	G	K	E	G	L	E	E	Y	L	V	S	K	H	I	L	T	N	T	N	P	Q	L	V	N	W
Template Known Secondary structure							.	.	.					S			S					S		S					.	.	.	.	.	.	.	.	.	.	.	T	T	S		B			S	G	G	G			S		B	S							T	T										S	S
Template Predicted Secondary structure							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		428	.	430	.	.				.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.												.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		454	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		494	.