Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 61 Aligned Residues 327 % Identity 20% Template c3ce9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase (np_348253.1) from2 clostridium acetobutylicum at 2.37 a resolution Resolution 2.37 Å

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		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	H	K	L	P	K	S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L
Query Conservation
Alig confidence																																												.																																					.
Template Conservation																																												.																																					.
Template Sequence		H	R	I	A	I	P	L	I	L	E	V	G	N	N	K	I	Y	N	I	G	Q	I	I	K	K	G	N	F	K	R	V	S	L	Y	F	G	E	G	I	Y	E	L	.	F	G	E	T	I	E	K	S	I	K	S	S	N	I	E	I	E	A	V	E	T	V	K	N	I	D	F	D	E	I	G	T	N	A	F	K	.
Template Known Secondary structure								S						S	S		G	G	G						G	G	G	T		S								T	T					.											T	T	T													B									T	T	.
Template Predicted Secondary structure																																												.																																					.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P	E	T	H	F	E	E	L	A	L	R	F	M	D	I	R	K	R	I	Y	K	F	P	K	M	G	V	K	A	K	M	I	A	V	T	T	T	S	G	T	G	S	E	V	T	P	F	A	V	V
Query Conservation
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	I	P	A	E	V	D	A	L	I	G	I	G	G	G	K	A	I	D	A	V	K	Y	X	A	F	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	P	F	I	S	V	P	T	S	T	S	N	D	G	F	S	S	P	V	A	S	L
Template Known Secondary structure		.	S		T	T									S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S			S	S	G	G	G	T	S	S
Template Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																														.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.						.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		T	D	D	A	T	G	Q	K	Y	P	L	A	D	Y	A	L	T	P	D	M	A	I	V	D	A	N	L	V	M	D	M	P	K	S	L	C	A	F	G	G	L	D	A	V	T	H	A	M	E	A	Y	.	.	.	.	.	V	S	V	L	A	S	E	F	S	D	G	Q	A	L	Q	A	L	K	L	L	K	E	Y	L
Query Conservation																																																					.	.	.	.	.
Alig confidence													.	.	.	.																																					.	.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		L	I	N	G	K	R	T	S	V	P	A	.	.	.	.	K	T	P	D	G	I	V	V	D	I	D	V	I	K	G	S	P	E	K	F	I	Y	S	G	I	G	D	L	V	S	N	I	T	A	L	Y	D	W	K	F	E	E	E	N	H	K	S	I	I	D	D	F	A	V	X	I	S	K	K	S	V	N	S	F	V
Template Known Secondary structure				T	T								.	.	.	.				S											T	S																												T	T	S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.						720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.			.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.																		.	.
Query SS confidence																																			.	.	.	.	.																		.	.
Query Sequence		P	A	S	Y	H	E	G	S	K	N	P	V	A	R	E	R	V	H	S	A	A	T	I	A	G	I	A	F	A	N	A	F	L	.	.	.	.	.	G	V	C	H	S	M	A	H	K	L	G	S	Q	F	H	I	P	.	.	H	G	L	A	N	A	L	L	I	C	N	V	I	R	Y	N	A	N	D	N	P	T	K
Query Conservation																																			.	.	.	.	.																		.	.
Alig confidence								.																											.	.	.	.	.																		.	.																				.	.	.	.
Template Conservation								.																																																																						.	.	.	.
Template Sequence		R	T	D	F	K	S	.	I	K	D	E	V	F	L	K	E	L	V	D	S	L	T	X	N	G	I	A	X	E	I	A	G	N	S	S	P	A	S	G	A	E	H	L	I	S	H	A	L	D	K	F	L	P	N	P	Q	L	H	G	I	Q	V	G	V	A	T	Y	I	X	S	K	V	H	K	H	R	.	.	.	.
Template Known Secondary structure						S		.	T	T																							T	S	S	T	T	T		S														S	S																				T	S	S	.	.	.	.
Template Predicted Secondary structure								.																																																																						.	.	.	.
Template SS confidence
		210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	A	F	S	Q	Y	D	R	P	Q	A	R	R	R	Y	A	E	I	A	D	H	L	G	L	S	A	P	G	D	R	T	A	A	K	I	E	K	L	L	A	W	L	E	T	L	K	A	E	L	G	I	P	K	S	I	R	E	A	G	V	Q	E	A	D	F	L	A	N	V	D	K	L	S	E	D	A	F	D	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	R	I	K	K	I	L	S	D	T	G	F	F	N	Y	V	K	G	L	N	X	K	K	S	D	F	K	R	A	I	S	.	E	A	H	L	I	K	P	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T							T	T													.						S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
																																									285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.
		840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	T	G	A	N	P	R	Y	P	L	I	S	E	L	K	Q	I	L	L	D
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		R	Y	T	Y	L	H	V	E	K	.	N	C	E	T	A	K	E	I	V	D	T
Template Known Secondary structure		S			G	G	G	S			.
Template Predicted Secondary structure											.
Template SS confidence
		325	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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