Job Description P0A9Q7 Confidence 59.47% Date Thu Jan 5 11:11:00 GMT 2012 Rank 253 Aligned Residues 70 % Identity 23% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	.	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I
Query Conservation																																																									.
Alig confidence																									.	.																					.	.									.														.	.
Template Conservation																									.	.																					.	.																							.	.
Template Sequence		T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	.	.	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	.	.	Y	G	D	E	T	R	T	K	S	P	V	D	I	V	K	E	G	M	E	K	F	K	.	.	K	A	D	V	L	I
Template Known Secondary structure																							S		.	.			T	T	G	G	G	S	S							S	S				.	.				S	S	S			S	S	S	T	T							T	T	S	.	.	S		S
Template Predicted Secondary structure																									.	.																					.	.																							.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions