Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 10 Aligned Residues 423 % Identity 19% Template c2jg7G_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity Resolution 2.83 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	V	T	N	V	A	E	L	N	A	L	V	E	R	V	K	K	A	Q	R	E	Y	A	S	F	T	Q	E	Q	V	D	K	I	F	R	A	A	A	L	A	A	A	D	A	R	I	P	L	A	K	M	A	V	A	E	S	G	M	G	I	V	E	D	K	V	I	K	N	H	F	A	S	E	Y	I	Y	N	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	Q	A	T	L	A	E	Y	E	E	T	V	Q	K	T	R	E	A	W	K	M	W	A	D	I	P	A	P	K	R	G	E	I	V	R	Q	I	G	D	A	L	R	K	K	I	K	V	L	G	S	L	V	S	L	E	M	G	K	I	Y	V	E	G	V	G	E	V	Q	E	Y	V	D	V	C	D	Y	A	V	G
Template Known Secondary structure																									T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		81	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		K	D	E	K	T	C	G	.	.	V	L	S	E	D	D	T	F	G	T	I	T	I	A	E	P	I	G	I	I	C	G	I	V	P	T	T	N	P	T	S	T	A	I	F	K	S	L	I	S	L	K	T	R	N	A	I	I	F	S	P	H	P	R	A	K	D	A	T	N	K	A	A	D	I	V	L	Q	A	A	I
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		L	S	R	M	I	G	G	P	V	L	P	S	E	R	P	G	H	A	L	I	E	Q	W	N	P	V	G	L	V	G	I	I	T	A	F	N	F	P	V	A	V	Y	G	W	N	N	A	I	A	L	T	C	G	N	V	C	L	W	K	G	A	P	T	T	P	L	T	S	V	A	V	T	K	I	V	A	E	V	L	E
Template Known Secondary structure			T	T	T									S	S	T	T											S								S	S	S	T	T													T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		A	A	G	A	P	K	D	L	I	G	W	I	D	Q	P	S	V	E	L	S	N	A	L	M	H	H	P	D	I	N	L	I	L	A	T	G	G	P	G	M	V	K	.	.	.	.	A	A	Y	S	S	G	K	P	A	I	G	V	G	A	G	N	T	P	V	V	I	D	E	T	A	D	I	K	R	A	V	A	S	V
Query Conservation																																												.	.	.	.
Alig confidence																.																												.	.	.	.
Template Conservation																.
Template Sequence		Q	N	N	L	P	G	A	I	C	S	M	T	C	G	.	G	A	D	I	G	T	A	M	A	K	D	E	R	V	D	L	L	S	F	T	G	S	T	H	V	G	K	M	V	A	M	M	V	Q	E	R	F	G	R	K	L	L	E	L	G	G	N	N	A	I	I	V	F	E	D	A	D	L	N	L	V	V	P	S	A
Template Known Secondary structure			T	T			G	G	G							.	S											T	T		S						S															T	T																	T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	S	K	T	F	D	N	G	V	I	C	A	S	E	Q	S	V	V	V	V	D	S	V	Y	D	A	V	R	E	R	F	A	T	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	L	L	Q	G	K	E	L	K	A	V	Q	D	V	I	L	K	N	G	A	L	N	A	A	I	V	G	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	A	S	V	G	T	A	G	Q	R	C	T	T	T	R	R	L	M	L	H	E	S	V	H	D	A	V	V	E	R	I	A	K	A	Y	K	Q	V	R	I	G	D	P	W	D	P	S	T	L	Y	G	P	L	H	T	K	Q	A	V	D	Q	Y	L	A	A	I	E	Q	A	K	Q	Q	G	G	T	L	V	C	G
Template Known Secondary structure							G	G	G	G		S	T	T									T	T	T													T	T			B			T	T	S	T	T		S	B				S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		P	A	Y	K	I	A	E	L	A	G	F	S	V	P	E	N	T	K	I	L	I	G	E	V	T	V	V	D	E	S	E	P	F	A	H	E	K	.	L	S	P	T	L	A	M	Y	R	A	K	D	F	E	D	A	V	E	K	A	E	K	L	V	A	M	G	G	I	G	H	T	S	C	L	Y	T	D	Q	D	N	Q
Query Conservation																																							.
Alig confidence						.	.	.	.	.	.	.	.																										.																							.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Sequence		G	K	V	M	.	.	.	.	.	.	.	.	D	R	P	G	N	Y	V	E	P	T	I	I	T	G	L	A	H	D	A	P	I	V	H	T	E	T	F	V	P	I	L	Y	V	L	K	F	K	T	E	E	E	A	F	A	W	N	N	E	.	.	.	.	V	Q	Q	G	L	S	S	S	I	F	T	K	D	L	G	R
Template Known Secondary structure			S	B		.	.	.	.	.	.	.	.	S	S	S	S	S		B										T	T						S				S	S																				.	.	.	.	S	S			S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
		370	.	.	.									.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.					.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		379	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		P	A	R	V	S	Y	F	.	.	G	Q	K	M	K	T	A	R	I	L	I	N	T	P	A	S	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T	L	G	C	G	S	W	G	G	N	S	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V	A	K	R	A
Query Conservation									.	.
Alig confidence					.	.	.		.	.																										.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		V	F	R	.	.	.	W	L	G	P	K	G	S	D	C	G	I	V	N	V	N	I	P	T	S	G	A	E	I	G	G	A	F	G	.	.	.	.	.	.	.	.	.	G	E	K	H	T	G	G	G	R	E	S	G	S	D	S	W	K	Q	Y	M	R	R	S	T	C	T	I	N	Y
Template Known Secondary structure					.	.	.			S	T	T	S			S	S					S	S		T	T				T	T	S				.	.	.	.	.	.	.	.	.		S	G	G	G		S					S	T	T	G	G	G	G	G
Template Predicted Secondary structure					.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		438	.	440				.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.										.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.