Job Description P0A9Q7 Confidence 100.00% Date Thu Jan 5 11:11:00 GMT 2012 Rank 65 Aligned Residues 330 % Identity 15% Template c2gruB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-deoxy-scyllo-inosose synthase; PDBTitle: crystal structure of 2-deoxy-scyllo-inosose synthase2 complexed with carbaglucose-6-phosphate, nad+ and co2+ Resolution 2.15 Å

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		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T	S	V	L	K	A	A	G	.	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P
Query Conservation																																																			.
Alig confidence																																					.														.
Template Conservation																																					.
Template Sequence		N	F	A	F	G	E	H	V	L	E	S	V	E	S	Y	I	P	R	D	E	F	D	Q	Y	I	M	I	S	D	S	G	V	P	D	S	.	I	V	H	Y	A	A	E	Y	F	G	K	L	A	P	V	H	I	L	R	F	Q	G	G	E	E	Y	K	T	L	S	T	V	T	N	L	Q	E	R	A	I	A	L	G	A
Template Known Secondary structure							T	T		G	G	G	G	G	G	T	S		S	S	S		S								T	T	S				.										T	T	T	S										S	G	G	G		B														T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		538				.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		D	.	.	.	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P	E	T	H	F	E	E	L	A	L	R	F	M	D	I	R	K	R	I	Y	K	F	P	K	M	G	V	K	A	K	M	I	A	V	T	T	T	S	G	T	G	S	E	V	T	P	F	A	V	V	T	D	D
Query Conservation			.	.	.
Alig confidence			.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	R	T	A	I	V	A	V	G	G	G	L	T	G	N	V	A	G	V	A	A	G	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	G	I	A	L	I	H	V	P	T	T	F	L	A	A	S	D	S	V	L	S	I	K	Q	A	V	N
Template Known Secondary structure			T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S						T	T	T	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	Q	K	Y	P	L	A	D	Y	A	L	T	P	D	M	A	I	V	D	A	N	L	V	M	D	M	P	K	S	L	C	A	F	G	G	L	D	A	V	T	H	A	M	E	A	Y	V	S	V	L	A	S	E	F	S	D	G	Q	A	L	Q	A	L	K	L	L	K	E	Y	L	P	A	S	Y	H	E	G	S
Query Conservation
Alig confidence															.																																					.	.																												.
Template Conservation															.																																					.	.																												.
Template Sequence		L	T	S	G	K	N	L	V	G	F	Y	Y	P	.	P	R	F	V	F	A	D	T	R	I	L	S	E	S	P	P	R	Q	V	K	A	G	M	C	E	L	V	K	N	M	L	I	L	E	N	D	.	.	N	K	E	F	T	E	D	D	L	N	S	A	N	V	Y	S	P	K	Q	L	E	T	F	I	N	F	C	.
Template Known Secondary structure			T	T											.		S											T	S																			S			S	.	.			S	S		G	G	G			S	S																.
Template Predicted Secondary structure															.																																					.	.																												.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.					.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		K	N	P	V	A	R	E	R	V	H	S	A	A	T	I	A	G	I	A	F	A	N	A	F	L	G	V	C	H	S	M	.	.	.	.	A	H	K	L	G	S	Q	F	H	I	P	H	G	L	A	N	A	L	L	I	C	N	V	I	R	Y	N	A	N	D	N	P	T	K	Q	T	A	F	S	Q	Y	D	R	P	Q
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	A	K	M	S	V	L	S	E	D	I	Y	E	K	K	K	G	L	I	F	E	Y	G	H	T	I	G	H	A	I	E	L	A	E	Q	G	G	I	T	H	G	E	A	I	A	V	G	M	I	Y	A	A	K	I	A	N	R	M	N	L	M	P	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T		T	T	S	S	S	G	G	G	G	G	G	T	T											T	T	T	S	S																				T	T	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		771	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.											.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	R	R	Y	A	E	I	A	D	H	L	G	L	S	A	P	G	D	R	T	A	A	K	I	E	K	L	L	A	W	L	E	T	.	.	.	.	.	.	.	.	.	.	L	K	A	E	L	G	I	P	K	S	I	R	E	A	G	V	Q	E	A	D	F	L	A	N	V	D	K	L	S	E	D	A	F
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																						.														.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																						.																																												.
Template Sequence		D	V	S	A	H	Y	W	L	L	N	K	I	G	A	L	Q	D	I	P	L	.	K	S	D	P	D	S	I	F	H	Y	L	I	H	D	N	D	E	D	N	L	G	M	I	L	L	S	G	V	G	K	P	A	M	Y	N	Q	T	L	L	T	P	V	R	.	K	T	L	I	K	E	V	I	R	E	G	L
Template Known Secondary structure													T	T	T	T	S	S				.		S																S										T	T					B	T	T	B	S						.
Template Predicted Secondary structure																						.																																												.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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