Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACF0
Confidence15.54%DateThu Jan 5 11:18:02 GMT 2012
Rank43Aligned Residues60
% Identity17%Templated1ussa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Linker histone H1/H5
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40...... ...50.........60.
Predicted Secondary structure 









.






Query SS confidence 












































.














Query Sequence  NKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVG. FGTFKVNHRAERTGR
Query Conservation 

 


  

     
  

  

  
   
   
  
  
 
  .

 
       
   
Alig confidence 












































.














Template Conservation 
  

 


   
             
  



 
  
 


 

 

 


 

      
Template Sequence  SRIVLKKYVKDTFSSKLKTSSNFDYLFNSAIKKCVENGELVQPKGPSGIIKLNKKKVKLST
Template Known Secondary structure 
TTTTS

SSTSS
SSTTSS
B

S





Template Predicted Secondary structure 
























Template SS confidence 




























































   198.200.........210.........220.........230.........240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions