Job Description P0ACF0 Confidence 99.89% Date Thu Jan 5 11:18:02 GMT 2012 Rank 6 Aligned Residues 90 % Identity 32% Template c2np2B_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:hbb; PDBTitle: hbb-dna complex Resolution 3.02 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																																														.
Query SS confidence															.	.	.	.	.																																														.
Query Sequence		M	N	K	T	Q	L	I	D	V	I	A	E	K	.	.	.	.	.	A	E	L	S	K	T	Q	A	K	A	A	L	E	S	T	L	A	A	I	T	E	S	L	K	E	G	D	A	V	Q	L	V	G	F	G	T	F	K	V	N	H	R	A	E	R	.	T	G	R	N	P	Q	T	G	K	E	I	K	I	A	A	A
Query Conservation															.	.	.	.	.																																														.
Alig confidence															.	.	.	.	.																																														.
Template Conservation
Template Sequence		V	T	K	S	D	I	V	D	Q	I	A	L	N	I	K	N	N	N	L	K	L	E	K	K	Y	I	R	L	V	I	D	A	F	F	E	E	L	K	S	N	L	C	S	N	N	V	I	E	F	R	S	F	G	T	F	E	V	R	K	R	K	G	R	L	N	A	R	N	P	Q	T	G	E	Y	V	K	V	L	D	H
Template Known Secondary structure																		T	T																									T	T						T	T	T											B	S	S		B		T	T	T			B			B
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	P	A	F	V	S	G	K	A	L	K	D	A	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	A	Y	F	R	P	G	K	D	L	K	E	R	V	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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