Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	D	L	L	Y	R	V	K	T	L	W	A	A	L	R	G	N	H	Y	T	W	P	A	I	D	I	T	L	P	G	N	R	H	F	H	L	I	G	S	I	H	M	G	S	H	D	M	A	P	L	P	T	R	L	L	K	K	L	K	N
Secondary structure
SS confidence
Disorder		?	?													?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	D	A	L	I	V	E	A	D	V	S	T	S	D	T	P	F	A	N	L	P	A	C	E	A	L	E	E	R	I	S	E	E	Q	L	Q	N	L	Q	H	I	S	Q	E	M	G	I	S	P	S	L	F	S	T	Q	P	L	W	Q	I
Secondary structure
SS confidence
Disorder													?	?						?	?	?	?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		A	M	V	L	Q	A	T	Q	A	Q	K	L	G	L	R	A	E	Y	G	I	D	Y	Q	L	L	Q	A	A	K	Q	Q	H	K	P	V	I	E	L	E	G	A	E	N	Q	I	A	M	L	L	Q	L	P	D	K	G	L	A	L	L	D
Secondary structure
SS confidence
Disorder													?	?	?	?	?	?															?	?	?																?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		D	T	L	T	H	W	H	T	N	A	R	L	L	Q	Q	M	M	S	W	W	L	N	A	P	P	Q	N	N	D	I	T	L	P	N	T	F	S	Q	S	L	Y	D	V	L	M	H	Q	R	N	L	A	W	R	D	K	L	R	A	M	P
Secondary structure
SS confidence
Disorder																																	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Sequence		P	G	R	Y	V	V	A	V	G	A	L	H	L	Y	G	E	G	N	L	P	Q	M	L	R
Secondary structure
SS confidence
Disorder																			?					?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2g5g chain X domain 1 Region: 144 - 264 Aligned: 107 Modelled: 117 Confidence: 94.9% Identity: 12% Fold: EreA/ChaN-like Superfamily: EreA/ChaN-like Family: ChaN-like Phyre2 PDB 3ndc chain B Region: 33 - 67 Aligned: 32 Modelled: 35 Confidence: 61.1% Identity: 16% PDB header:transferase Chain: B: PDB Molecule:precorrin-4 c(11)-methyltransferase; PDBTitle: crystal structure of precorrin-4 c11-methyltransferase from2 rhodobacter capsulatus Phyre2 PDB 3hh1 chain D Region: 33 - 106 Aligned: 71 Modelled: 74 Confidence: 59.7% Identity: 15% PDB header:transferase Chain: D: PDB Molecule:tetrapyrrole methylase family protein; PDBTitle: the structure of a tetrapyrrole methylase family protein domain from2 chlorobium tepidum tls Phyre2 PDB 2npn chain A Region: 31 - 67 Aligned: 34 Modelled: 36 Confidence: 51.6% Identity: 26% PDB header:transferase Chain: A: PDB Molecule:putative cobalamin synthesis related protein; PDBTitle: crystal structure of putative cobalamin synthesis related protein2 (cobf) from corynebacterium diphtheriae Phyre2 PDB 3nd1 chain B Region: 32 - 67 Aligned: 33 Modelled: 36 Confidence: 45.3% Identity: 21% PDB header:transferase Chain: B: PDB Molecule:precorrin-6a synthase/cobf protein; PDBTitle: crystal structure of precorrin-6a synthase from rhodobacter capsulatus Phyre2 PDB 1cbf chain A Region: 28 - 67 Aligned: 37 Modelled: 40 Confidence: 37.8% Identity: 24% Fold: Tetrapyrrole methylase Superfamily: Tetrapyrrole methylase Family: Tetrapyrrole methylase Phyre2 PDB 1cbf chain A Region: 28 - 67 Aligned: 37 Modelled: 40 Confidence: 37.8% Identity: 24% PDB header:methyltransferase Chain: A: PDB Molecule:cobalt-precorrin-4 transmethylase; PDBTitle: the x-ray structure of a cobalamin biosynthetic enzyme, cobalt2 precorrin-4 methyltransferase, cbif Phyre2 PDB 1pjq chain A domain 2 Region: 33 - 66 Aligned: 31 Modelled: 34 Confidence: 36.9% Identity: 26% Fold: Tetrapyrrole methylase Superfamily: Tetrapyrrole methylase Family: Tetrapyrrole methylase Phyre2 PDB 1wyz chain A domain 1 Region: 31 - 67 Aligned: 37 Modelled: 37 Confidence: 36.7% Identity: 16% Fold: Tetrapyrrole methylase Superfamily: Tetrapyrrole methylase Family: Tetrapyrrole methylase Phyre2 PDB 2qbu chain A Region: 33 - 67 Aligned: 32 Modelled: 35 Confidence: 34.7% Identity: 19% PDB header:transferase Chain: A: PDB Molecule:precorrin-2 methyltransferase; PDBTitle: crystal structure of methanothermobacter thermautotrophicus cbil Phyre2 PDB 2e0k chain A Region: 33 - 67 Aligned: 32 Modelled: 35 Confidence: 34.2% Identity: 19% PDB header:transferase Chain: A: PDB Molecule:precorrin-2 c20-methyltransferase; PDBTitle: crystal structure of cbil, a methyltransferase involved in anaerobic2 vitamin b12 biosynthesis Phyre2 PDB 3kwp chain A Region: 33 - 105 Aligned: 69 Modelled: 73 Confidence: 32.9% Identity: 12% PDB header:transferase Chain: A: PDB Molecule:predicted methyltransferase; PDBTitle: crystal structure of putative methyltransferase from lactobacillus2 brevis Phyre2 PDB 1va0 chain A domain 1 Region: 33 - 67 Aligned: 32 Modelled: 35 Confidence: 32.8% Identity: 25% Fold: Tetrapyrrole methylase Superfamily: Tetrapyrrole methylase Family: Tetrapyrrole methylase Phyre2 PDB 2ybo chain A Region: 33 - 65 Aligned: 30 Modelled: 33 Confidence: 29.9% Identity: 27% PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: the x-ray structure of the sam-dependent uroporphyrinogen2 iii methyltransferase nire from pseudomonas aeruginosa in3 complex with sah Phyre2 PDB 2ebf chain X domain 2 Region: 221 - 259 Aligned: 39 Modelled: 39 Confidence: 29.8% Identity: 10% Fold: EreA/ChaN-like Superfamily: EreA/ChaN-like Family: PMT domain-like Phyre2 PDB 1vhv chain A Region: 34 - 67 Aligned: 31 Modelled: 34 Confidence: 27.5% Identity: 26% Fold: Tetrapyrrole methylase Superfamily: Tetrapyrrole methylase Family: Tetrapyrrole methylase Phyre2 PDB 1zbs chain A domain 2 Region: 32 - 70 Aligned: 38 Modelled: 38 Confidence: 27.0% Identity: 21% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: BadF/BadG/BcrA/BcrD-like Phyre2 PDB 2bb3 chain B Region: 31 - 65 Aligned: 31 Modelled: 35 Confidence: 25.5% Identity: 16% PDB header:transferase Chain: B: PDB Molecule:cobalamin biosynthesis precorrin-6y methylase (cbie); PDBTitle: crystal structure of cobalamin biosynthesis precorrin-6y methylase2 (cbie) from archaeoglobus fulgidus Phyre2 PDB 2az4 chain A domain 1 Region: 16 - 67 Aligned: 51 Modelled: 52 Confidence: 22.5% Identity: 12% Fold: Metallo-hydrolase/oxidoreductase Superfamily: Metallo-hydrolase/oxidoreductase Family: beta-CASP RNA-metabolising hydrolases Phyre2 PDB 1s4d chain A Region: 33 - 67 Aligned: 32 Modelled: 35 Confidence: 20.8% Identity: 25% Fold: Tetrapyrrole methylase Superfamily: Tetrapyrrole methylase Family: Tetrapyrrole methylase Phyre2 1 d2g5gx1 2 c3ndcB_ 3 c3hh1D_ 4 c2npnA_ 5 c3nd1B_ 6 d1cbfa_ 7 c1cbfA_ 8 d1pjqa2 9 d1wyza1 10 c2qbuA_ 11 c2e0kA_ 12 c3kwpA_ 13 d1va0a1 14 c2yboA_ 15 d2ebfx2 16 d1vhva_ 17 d1zbsa2 18 c2bb3B_ 19 d2az4a1 20 d1s4da_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2g5gx1 94.9 12 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:ChaN-like 2 c3ndcB_ 61.1 16 PDB header:transferase Chain: B: PDB Molecule:precorrin-4 c(11)-methyltransferase; PDBTitle: crystal structure of precorrin-4 c11-methyltransferase from2 rhodobacter capsulatus 3 c3hh1D_ 59.7 15 PDB header:transferase Chain: D: PDB Molecule:tetrapyrrole methylase family protein; PDBTitle: the structure of a tetrapyrrole methylase family protein domain from2 chlorobium tepidum tls 4 c2npnA_ 51.6 26 PDB header:transferase Chain: A: PDB Molecule:putative cobalamin synthesis related protein; PDBTitle: crystal structure of putative cobalamin synthesis related protein2 (cobf) from corynebacterium diphtheriae 5 c3nd1B_ 45.3 21 PDB header:transferase Chain: B: PDB Molecule:precorrin-6a synthase/cobf protein; PDBTitle: crystal structure of precorrin-6a synthase from rhodobacter capsulatus 6 d1cbfa_ 37.8 24 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 7 c1cbfA_ 37.8 24 PDB header:methyltransferase Chain: A: PDB Molecule:cobalt-precorrin-4 transmethylase; PDBTitle: the x-ray structure of a cobalamin biosynthetic enzyme, cobalt2 precorrin-4 methyltransferase, cbif 8 d1pjqa2 36.9 26 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 9 d1wyza1 36.7 16 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 10 c2qbuA_ 34.7 19 PDB header:transferase Chain: A: PDB Molecule:precorrin-2 methyltransferase; PDBTitle: crystal structure of methanothermobacter thermautotrophicus cbil 11 c2e0kA_ 34.2 19 PDB header:transferase Chain: A: PDB Molecule:precorrin-2 c20-methyltransferase; PDBTitle: crystal structure of cbil, a methyltransferase involved in anaerobic2 vitamin b12 biosynthesis 12 c3kwpA_ 32.9 12 PDB header:transferase Chain: A: PDB Molecule:predicted methyltransferase; PDBTitle: crystal structure of putative methyltransferase from lactobacillus2 brevis 13 d1va0a1 32.8 25 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 14 c2yboA_ 29.9 27 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: the x-ray structure of the sam-dependent uroporphyrinogen2 iii methyltransferase nire from pseudomonas aeruginosa in3 complex with sah 15 d2ebfx2 29.8 10 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:PMT domain-like 16 d1vhva_ 27.5 26 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 17 d1zbsa2 27.0 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:BadF/BadG/BcrA/BcrD-like 18 c2bb3B_ 25.5 16 PDB header:transferase Chain: B: PDB Molecule:cobalamin biosynthesis precorrin-6y methylase (cbie); PDBTitle: crystal structure of cobalamin biosynthesis precorrin-6y methylase2 (cbie) from archaeoglobus fulgidus 19 d2az4a1 22.5 12 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 20 d1s4da_ 20.8 25 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 21 d1vqqa1 not modelled 19.7 9 Fold:Cystatin-like Superfamily:NTF2-like Family:Penicillin binding protein 2a (PBP2A), N-terminal domain 22 d1wdea_ not modelled 19.7 23 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 23 d1ve2a1 not modelled 19.6 23 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 24 c1mwuA_ not modelled 17.9 8 PDB header:biosynthetic protein Chain: A: PDB Molecule:penicillin-binding protein 2a; PDBTitle: structure of methicillin acyl-penicillin binding protein 2a2 from methicillin resistant staphylococcus aureus strain3 27r at 2.60 a resolution. 25 c2ad5B_ not modelled 17.7 20 PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution. 26 d1ylqa1 not modelled 17.5 30 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 27 c2vt2A_ not modelled 17.4 17 PDB header:transcription Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: structure and functional properties of the bacillus2 subtilis transcriptional repressor rex 28 c2fr1A_ not modelled 16.7 20 PDB header:oxidoreductase Chain: A: PDB Molecule:erythromycin synthase, eryai; PDBTitle: the first ketoreductase of the erythromycin synthase2 (crystal form 2) 29 d2fxta1 not modelled 16.7 0 Fold:Cystatin-like Superfamily:NTF2-like Family:TIM44-like 30 d2cw9a1 not modelled 16.6 2 Fold:Cystatin-like Superfamily:NTF2-like Family:TIM44-like 31 d2i7xa1 not modelled 15.8 3 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 32 c2i7xA_ not modelled 15.8 3 PDB header:rna binding protein, protein binding Chain: A: PDB Molecule:protein cft2; PDBTitle: structure of yeast cpsf-100 (ydh1p) 33 d1ybha3 not modelled 14.6 13 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 34 d1s1ma2 not modelled 14.4 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 35 d2dkfa1 not modelled 13.5 20 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 36 d2deka1 not modelled 13.0 26 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 37 c2z5lA_ not modelled 12.9 18 PDB header:transferase Chain: A: PDB Molecule:tylactone synthase starter module and modules 1 PDBTitle: the first ketoreductase of the tylosin pks 38 d1m6ia2 not modelled 12.6 13 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 39 c3nutC_ not modelled 12.6 13 PDB header:transferase Chain: C: PDB Molecule:precorrin-3 methylase; PDBTitle: crystal structure of the methyltransferase cobj 40 d2ewca1 not modelled 12.4 16 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 41 c2zvbA_ not modelled 12.3 33 PDB header:transferase Chain: A: PDB Molecule:precorrin-3 c17-methyltransferase; PDBTitle: crystal structure of tt0207 from thermus thermophilus hb8 42 c3jz0B_ not modelled 11.9 18 PDB header:transferase/antibiotic Chain: B: PDB Molecule:lincosamide nucleotidyltransferase; PDBTitle: linb complexed with clindamycin and ampcpp 43 c3mjsA_ not modelled 11.5 20 PDB header:oxidoreductase Chain: A: PDB Molecule:amphb; PDBTitle: structure of a-type ketoreductases from modular polyketide synthase 44 c1kbwA_ not modelled 11.2 13 PDB header:oxidoreductase Chain: A: PDB Molecule:major outer membrane protein pan 1; PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae 45 c3qk9B_ not modelled 11.1 3 PDB header:protein transport Chain: B: PDB Molecule:mitochondrial import inner membrane translocase subunit PDBTitle: yeast tim44 c-terminal domain complexed with cymal-3 46 c3i4tA_ not modelled 10.4 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:diphthine synthase; PDBTitle: crystal structure of putative diphthine synthase from2 entamoeba histolytica 47 c2xagA_ not modelled 9.5 17 PDB header:transcription Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1-corest in complex with para-bromo-2 (-)-trans-2-phenylcyclopropyl-1-amine 48 c2v1dA_ not modelled 9.5 17 PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition 49 c1pjtB_ not modelled 8.9 27 PDB header:transferase/oxidoreductase/lyase Chain: B: PDB Molecule:siroheme synthase; PDBTitle: the structure of the ser128ala point-mutant variant of cysg,2 the multifunctional3 methyltransferase/dehydrogenase/ferrochelatase for4 siroheme synthesis 50 d2cxaa1 not modelled 8.3 21 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:LFTR-like 51 c2cxaA_ not modelled 8.3 21 PDB header:transferase Chain: A: PDB Molecule:leucyl/phenylalanyl-trna-protein transferase; PDBTitle: crystal structure of leucyl/phenylalanyl-trna protein2 transferase from escherichia coli 52 d1ohpa1 not modelled 8.2 3 Fold:Cystatin-like Superfamily:NTF2-like Family:Ketosteroid isomerase-like 53 c2q7xA_ not modelled 8.1 4 PDB header:transferase Chain: A: PDB Molecule:upf0052 protein sp_1565; PDBTitle: crystal structure of a putative phospho transferase (sp_1565) from2 streptococcus pneumoniae tigr4 at 2.00 a resolution 54 d1vcoa2 not modelled 7.6 18 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 55 d1h6la_ not modelled 7.5 28 Fold:6-bladed beta-propeller Superfamily:Thermostable phytase (3-phytase) Family:Thermostable phytase (3-phytase) 56 c3d64A_ not modelled 7.3 15 PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei 57 d2k54a1 not modelled 7.3 4 Fold:Cystatin-like Superfamily:NTF2-like Family:Atu0742-like 58 d2bb3a1 not modelled 6.6 18 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 59 d2cpga_ not modelled 6.6 43 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 60 d2ok5a4 not modelled 6.2 27 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 61 d2jfga1 not modelled 6.2 13 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 62 d1wm1a_ not modelled 6.1 27 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Proline iminopeptidase-like 63 d2o0qa1 not modelled 6.1 15 Fold:ADP-ribosylation Superfamily:ADP-ribosylation Family:CC0527-like 64 c2w8iG_ not modelled 6.0 10 PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345. 65 d2i7ta1 not modelled 6.0 18 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 66 c3fh1A_ not modelled 6.0 7 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of a ntf2-like protein of unknown function (mll8193)2 from mesorhizobium loti at 1.60 a resolution 67 c3f8hA_ not modelled 5.9 3 PDB header:unknown function Chain: A: PDB Molecule:putative polyketide cyclase; PDBTitle: crystal structure of a putative polyketide cyclase (tm1040_3560) from2 silicibacter sp. tm1040 at 2.00 a resolution 68 c3g5wC_ not modelled 5.8 19 PDB header:metal binding protein Chain: C: PDB Molecule:multicopper oxidase type 1; PDBTitle: crystal structure of blue copper oxidase from nitrosomonas europaea 69 d1no5a_ not modelled 5.8 20 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 70 c2dbqA_ not modelled 5.7 9 PDB header:oxidoreductase Chain: A: PDB Molecule:glyoxylate reductase; PDBTitle: crystal structure of glyoxylate reductase (ph0597) from pyrococcus2 horikoshii ot3, complexed with nadp (i41) 71 c3evtA_ not modelled 5.7 9 PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from2 lactobacillus plantarum 72 d3b55a1 not modelled 5.7 10 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:EreA-like 73 c3ff2A_ not modelled 5.6 4 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized cystatin fold protein (yp_497570.1) from PDBTitle: crystal structure of an uncharacterized cystatin fold protein2 (saro_2299) from novosphingobium aromaticivorans dsm at 1.90 a3 resolution 74 c2yxwB_ not modelled 5.6 19 PDB header:oxidoreductase Chain: B: PDB Molecule:blue copper oxidase cueo; PDBTitle: the deletion mutant of multicopper oxidase cueo 75 d2f99a1 not modelled 5.5 5 Fold:Cystatin-like Superfamily:NTF2-like Family:SnoaL-like polyketide cyclase 76 d2ffea1 not modelled 5.5 10 Fold:CofD-like Superfamily:CofD-like Family:CofD-like 77 d1z1sa1 not modelled 5.4 7 Fold:Cystatin-like Superfamily:NTF2-like Family:PhzA/PhzB-like 78 c2zwnA_ not modelled 5.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:two-domain type laccase; PDBTitle: crystal structure of the novel two-domain type laccase from a2 metagenome 79 d1t6aa_ not modelled 5.3 13 Fold:TBP-like Superfamily:Rbstp2229 protein Family:Rbstp2229 protein 80 d3ec9a1 not modelled 5.3 7 Fold:Cystatin-like Superfamily:NTF2-like Family:PhzA/PhzB-like 81 c2j58G_ not modelled 5.1 11 PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza 82 d2bnga1 not modelled 5.1 13 Fold:Cystatin-like Superfamily:NTF2-like Family:Limonene-1,2-epoxide hydrolase-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0