PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2npnA_

Fold library id	PDB Header	Molecule	Title
c2npnA_	PDB header: transferase	Chain: A: PDB Molecule: putative cobalamin synthesis related protein;	PDBTitle: crystal structure of putative cobalamin synthesis related2 protein (cobf) from corynebacterium diphtheriae

Links to external resources
Added to library: Tue Mar 16 13:20:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X R T I Y V I G I G T G S P E F L T L Q A I S G L R H A Q A I V A L D Q K S D L L A L R Q K I V D T H A P G T P I Y A V T D E E E V R R W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S
G G G
S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H A E R A H L L A S T I R E R T P D D G A V A F L V W G D P S L Y D S T L R I I E H X R N L E D L H A D V K V I P G I T A V Q V L T A E H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S B
T T S S
T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I L I N R I G E A I H I T T G R N L P E T S A K D R R N C V V X L D G K T A W Q D V A T E H T Y X W W G A F L G T E Q Q V L R K G Y V H E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T T G G G S
T T G G G S
S S
T
T T S T T S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence G A Q V A E L K Q Q L R T E H G W I X D T Y L L R E L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	R	T	I	Y	V	I	G	I	G	T	G	S	P	E	F	L	T	L	Q	A	I	S	G	L	R	H	A	Q	A	I	V	A	L	D	Q	K	S	D	L	L	A	L	R	Q	K	I	V	D	T	H	A	P	G	T	P	I	Y	A	V	T	D	E	E	E	V	R	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B	S	S		G	G	G													S																							S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	A	E	R	A	H	L	L	A	S	T	I	R	E	R	T	P	D	D	G	A	V	A	F	L	V	W	G	D	P	S	L	Y	D	S	T	L	R	I	I	E	H	X	R	N	L	E	D	L	H	A	D	V	K	V	I	P	G	I	T	A	V	Q	V	L	T	A	E	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		T	T								S	B		T	T	S	S															T																						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	L	I	N	R	I	G	E	A	I	H	I	T	T	G	R	N	L	P	E	T	S	A	K	D	R	R	N	C	V	V	X	L	D	G	K	T	A	W	Q	D	V	A	T	E	H	T	Y	X	W	W	G	A	F	L	G	T	E	Q	Q	V	L	R	K	G	Y	V	H	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		T	T								T	T	T	G	G	G	S		T	T	G	G	G						S		S	S		T							T	T								S	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence	G	A	Q	V	A	E	L	K	Q	Q	L	R	T	E	H	G	W	I	X	D	T	Y	L	L	R	E	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S