 |
Job Description | P77301 | Confidence | 15.78% | Date | Thu Jan 5 12:27:28 GMT 2012 |
Rank | 32 | Aligned Residues | 32 |
% Identity | 3% | Template | c2i7xA_ |
PDB info |
PDB header:rna binding protein, protein binding | Chain: A: PDB Molecule:protein cft2; |
PDBTitle: structure of yeast cpsf-100 (ydh1p)
|
Resolution | 2.50 Å |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | H | Y | T | W | P | A | I | D | I | T | L | P | G | N | R | H | F | H | L | I | G | S | I | H | M | G | S | H | D | M |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
A | G | V | C | P | G | G | S | I | W | C | I | S | T | Y | S | E | K | L | V | Y | A | K | R | W | N | H | T | R | D | N | I |
Template Known Secondary structure |   |
| S | S | S | T | T |
|  |  |  |  |  |  |
| S | S |
|  |  |  |  |
| S | S |
|
| S | S |
|
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|