Job Description Q47377 Confidence 0.79% Date Thu Jan 5 12:36:46 GMT 2012 Rank 79 Aligned Residues 88 % Identity 23% Template c3j01A_ PDB info PDB header:ribosome/ribosomal protein Chain: A: PDB Molecule:preprotein translocase secy subunit; PDBTitle: structure of the ribosome-secye complex in the membrane environment Resolution 7.10 Å

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		17	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure								.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	C	Q	K	Q	.	.	.	.	.	A	T	C	F	V	A	I	N	K	R	R	K	H	I	V	L	W	L	G	L	A	L	A	C	L	G	L	A	M	V	L	W	L	L	V	L	Q	N	V	P	V	.	.	.	.	.	.	.	.	.	G	I	A	Y	P	M	L	S	L	N	F	V	W	V	T	L	A	A	V
Query Conservation								.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																																										.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																																	.
Template Sequence		Q	L	L	T	V	V	H	P	T	L	A	E	I	K	K	E	G	E	S	G	R	R	K	I	S	Q	Y	T	R	Y	G	T	L	V	L	A	I	F	Q	S	I	G	I	A	T	G	L	P	N	M	P	G	M	Q	G	L	V	I	N	P	G	F	A	F	Y	F	T	A	V	V	S	L	V	T	G	T	M	F	L	.
Template Known Secondary structure									S	S	S	S	S		S			T																														G	G	G	S	S				S					S		S		S	T	T														.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		83	.	.	.	.	.	.	90	.	.	.	.	.		.	.		.	.	100	.	.	.	.	.
Predicted Secondary structure															.			.
Query SS confidence															.			.
Query Sequence		K	L	W	H	E	P	V	S	P	R	H	W	C	.	G	V	.	A	F	I	I	G	G	I	V
Query Conservation															.			.
Alig confidence															.			.
Template Conservation
Template Sequence		M	W	L	G	E	Q	I	T	E	R	G	I	G	N	G	I	S	I	I	I	F	A	G	I	V
Template Known Secondary structure								S	T	T	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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