Job Description Q47377 Confidence 97.68% Date Thu Jan 5 12:36:46 GMT 2012 Rank 2 Aligned Residues 75 % Identity 25% Template c2i68B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:protein emre; PDBTitle: cryo-em based theoretical model structure of transmembrane2 domain of the multidrug-resistance antiporter from e. coli3 emre Resolution NULL Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		W	L	T	L	V	F	A	S	L	L	S	V	A	G	Q	L	C	Q	K	Q	A	T	C	F	V	A	I	N	K	R	R	K	H	I	V	L	W	L	G	L	A	L	A	C	L	G	L	A	M	V	L	W	L	L	V	L	Q	N	V	P	V	G	I	A	Y	P	M	L	S	.	L	N	F	V	W	V	T	L	A	A
Query Conservation																																																																							.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.								.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		Y	I	Y	L	G	G	A	I	L	A	E	V	I	G	T	T	L	M	V	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	C	Y	C	A	S	F	W	L	L	A	Q	T	L	A	.	.	.	.	.	I	A	Y	A	I	W	S	G	V	G	I	V	L	I	S	L	L	S
Template Known Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	W	H	E	P	V	S	P	R	H	W	C	G	V	A	F	I	I	G	G	I	V	I	L	G
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		W	G	F	F	G	.	.	.	.	.	.	A	I	I	G	M	M	L	I	C	A	G	V	L	I	I	N
Template Known Secondary structure							.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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