Return to main results Retrieve Phyre Job Id

Job DescriptionP69776
Confidence10.83%DateThu Jan 5 12:11:50 GMT 2012
Rank80Aligned Residues10
% Identity50%Templatec1vb8A_
PDB info PDB header:plant proteinChain: A: PDB Molecule:viola hederacea root peptide 1; PDBTitle: solution structure of vhr1, the first cyclotide from root2 tissue
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.......
Predicted Secondary structure 


Query SS confidence 









Query Sequence  LAGCSSNAKI
Query Conservation 





   
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Template Conservation 





  

Template Sequence  LLGCSCSNKV
Template Known Secondary structure  GGT

BSSSS
Template Predicted Secondary structure 







Template SS confidence 









   15....20....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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