Return to main results Retrieve Phyre Job Id

Job DescriptionP69776
Confidence99.58%DateThu Jan 5 12:11:50 GMT 2012
Rank2Aligned Residues50
% Identity72%Templatec1t8zA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:major outer membrane lipoprotein; PDBTitle: atomic structure of a novel tryptophan-zipper pentamer
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70....
Predicted Secondary structure 
Query SS confidence 

















































Query Sequence  AKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMAT
Query Conservation    
 



 

 

 

 

  


 

 

 


 

 


 



   
Alig confidence 

















































Template Conservation 

 

 


 

 


 

 


 

 


 

 


 

 


 

 

Template Sequence  AKWDQWSSDWQTWNAKWDQWSNDWNAWRSDWQAWKDDWARWNQRWDNWAT
Template Known Secondary structure 

Template Predicted Secondary structure 



Template SS confidence 

















































   4.....10.........20.........30.........40.........50...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions