Return to main results Retrieve Phyre Job Id

Job DescriptionP75687
Confidence97.82%DateThu Jan 5 12:13:08 GMT 2012
Rank1Aligned Residues76
% Identity30%Templated2jnaa1
SCOP infoDodecin subunit-like YdgH-like YdgH-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30....... ..40.........50.........60.......
Predicted Secondary structure 





...........


...







.
Query SS confidence 























. . . . . . . . . . .










. . .





























.
Query Sequence  KKSVLFATLLSGVMAFSTNADDKI. . . . . . . . . . . ILKHISVSSVS. . . ASPTVLEDTIADIARKYNASSWKVTSMRID.
Query Conservation 























...........










...





























.
Alig confidence 























...........










...





























.
Template Conservation 

  
 
   

  



 

 


  

    
   




    
   

 
    

 


  

 

 


    
Template Sequence  KKRIIAAALLATVASFSTLAAEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHG
Template Known Secondary structure 


















S




T
SSS

ST
ST
Template Predicted Secondary structure 























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   68.70........
Predicted Secondary structure 




Query SS confidence 










Query Sequence  NNSTATAVLYK
Query Conservation 










Alig confidence 










Template Conservation       

 


Template Sequence  PNFEAVAEVYN
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 










   82.......90..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions