Job Description P75780 Confidence 96.12% Date Thu Jan 5 12:14:03 GMT 2012 Rank 20 Aligned Residues 189 % Identity 12% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	Q	P	P	G	G	N	N	F	A	L	A	Q	S	G	S	G	N	S	A	N	R	T	D	F	K	P	Q	K	A	N	T	S	E	I	G	T	K	W	Q	V	L	D	K	R	L	L	L	T	A	A	L	F	R	T	D	I	E	N	E	V	E	Q	N	D	D	G	T	Y	S	Q	Y	G	K	K	R	V	E	G
Query Conservation
Alig confidence																																												.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	Y	T	P	N	F	G	G	F	N	A	G	F	G	Y	A	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	N	.	.	G	P	L	S	A	S	L	G	L	A	Q	Q	K	.	.	.	.	.	.	.	.	.	.	.	T	A	V	G	G	L	A	T	D	R	D	E
Template Known Secondary structure								B	T	T											T	T			B	T	T	B	S	S	T	T												.	.	S	S												.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																												.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.												.	.	.	.	.	.	200	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	S	V	A	G	N	I	T	P	A	W	Q	V	I	G	G	Y	T	Q	Q	K	A	T	I	K	N	G	K	D	V	A	Q	D	G	S	S	S	L	P	Y	T	P	E	H	A	F	T	L	W	S	Q	Y	Q	A	T	D	D	I	S	V	G	A	G	A	R	Y	I	G	S	M	H	K	G	S	D	G	A	V
Query Conservation
Alig confidence													.																							.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation													.																							.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		I	T	L	G	A	S	Y	N	F	G	V	.	A	K	L	S	G	L	L	Q	Q	T	K	F	K	R	D	I	G	G	D	I	K	T	.	.	.	.	.	.	.	.	.	.	.	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	D	.	.	.	.	.
Template Known Secondary structure											S	S	.															T	T	S						.	.	.	.	.	.	.	.	.	.	.												T	T	T													G	G	G	T	.	.	.	.	.
Template Predicted Secondary structure													.																							.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.						750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		G	T	P	A	F	T	E	G	Y	W	V	A	D	A	K	L	G	Y	R	V	N	R	N	L	D	F	Q	L	N	V	Y	N	L	F	D	T	D	Y	V	A	S	I	N	K	S	G	Y	R	Y	H	P	G	E	P	.	.	.	.	.	R	T	F	L	L	T	A	N	M	H	F
Query Conservation																																																								.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure		.	.	.	.	.	.														S	S	S	S														T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions