Job Description P75780 Confidence 64.67% Date Thu Jan 5 12:14:03 GMT 2012 Rank 38 Aligned Residues 132 % Identity 12% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.					.	.	630	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		D	F	K	P	Q	K	A	N	T	S	E	I	G	T	K	W	Q	V	L	D	K	R	L	L	L	T	A	A	L	F	R	T	D	I	E	N	E	V	E	Q	N	D	D	G	T	Y	S	Q	Y	G	K	K	R	V	E	G	Y	E	I	S	V	A	G	N	I	T	P	A	.	.	.	.	W	Q	V	I	G	G	Y	T
Query Conservation																																																																						.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P	Y	L	G	A	R	L	S
Template Known Secondary structure		S	S																	T	T													S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	S																		S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K	A	T	I	K	N	G	K	D	V	A	Q	D	G	S	S	S	L	P	Y	T	P	E	H	A	F	T	L	W	S	Q	Y	Q	A	T	D	D	I	S	V	G	A	G	A	R	Y	I	G	S	M	H	K	G	S	D	G	A	V	G	T	P	A	F	T	E	G	Y	W	V	A	D	A	K	L	G	Y	R	V
Query Conservation
Alig confidence																					.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		L	N	R	A	S	V	D	L	G	G	S	D	S	F	S	Q	T	S	I	.	.	.	.	.	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	.	.	.	.	.	.	.	N	V	R	S	G	E	L	S	A	G	V	R	V	K	F
Template Known Secondary structure										T	T										.	.	.	.	.														T	T																T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions