Job Description P75780 Confidence 2.95% Date Thu Jan 5 12:14:03 GMT 2012 Rank 86 Aligned Residues 230 % Identity 10% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	F	A	I	Y	A	F	D	T	L	Q	I	T	R	D	F	E	L	N	G	G	I	R	L	D	N	Y	H	T	E	Y	D	S	A	T	A	C	G	G	S	G	R	G	A	I	T	C	P	T	G	V	A	K	G	S	P	V	T	T	V	D	T	A	K	S	G	N	L	M	N	W	K	A	G	A	L	Y	H	L
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		N	A	A	I	I	K	G	A	I	N	W	D	L	M	P	Q	I	S	I	G	A	A	G	W	T	T	L	G	S	R	G	G	N	M	V	D	Q	D	W	M	D	S	S	N	P	.	.	.	.	.	.	.	G	T	W	T	D	E	A	R	H	P	D	T	Q	L	N	Y	A	N	E	F	D	L	N	I	K	G	W	L
Template Known Secondary structure															S	S	S											S	S														T	T	S	T	.	.	.	.	.	.	.	T	S		S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.							.	.	560	.	.	.	.	.	.	.	.	.	570								.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure																																				.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		T	E	N	G	N	V	Y	I	N	Y	A	V	S	Q	Q	P	P	G	G	N	N	F	A	L	A	Q	S	G	S	G	N	S	A	N	.	.	.	.	.	.	R	T	D	F	K	P	Q	K	A	N	T	S	E	.	.	.	.	.	.	.	I	G	T	K	W	Q	V	L	D	K	R	L	L	L	T	A	A	L	F	R
Query Conservation																																				.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	E	D	F	E	L	G	G	T	F	K	Y
Template Known Secondary structure					S	S																									B			T	T		S	S		B			B			T	T		S																						T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
							591	.	.	.	.	.	.	.	.	600	.			.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure		.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	T	D	I	E	N	E	V	E	Q	N	D	.	.	D	G	T	Y	S	Q	Y	G	K	K	R	V	E	G	Y	E	I	S	V	A	G	N	I	T	P	A	W	Q	V	I	G	G	Y	T	Q	Q	K	A	T	I	K	N	G	K	D	V	A	Q	D	G	S	S	S	L	P	Y	T	P	E	H	A	F
Query Conservation		.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.												.	.
Template Conservation
Template Sequence		S	G	W	V	E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A
Template Known Secondary structure																S	S	S																										T	T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	W	S	Q	Y	Q	A	T	D	D	I	S	V	G	A	G	A	R	Y
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		G	I	E	N	Y	N	F	I	.	.	.	T	T	A	G	L	K	Y	T	F
Template Known Secondary structure										.	.	.
Template Predicted Secondary structure										.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions