Job Description P75780 Confidence 5.62% Date Thu Jan 5 12:14:03 GMT 2012 Rank 66 Aligned Residues 135 % Identity 8% Template c2y0hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:probable porin; PDBTitle: crystal structure of pseudomonas aeruginosa opdl Resolution 2.20 Å

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		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	L	Y	H	L	T	E	N	G	N	V	Y	I	N	Y	A	V	S	Q	Q	P	P	G	G	N	N	F	A	L	A	Q	S	G	S	G	N	S	A	N	R	T	D	F	K	P	Q	K	A	N	T	S	E	I	G	T	K	W	Q	V	L	D	K	R	L	L	L	T	A	A	L	F	R	T	D	I	E	N	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		A	L	L	T	S	S	E	I	E	G	L	T	L	T	A	G	Q	L	W	K	S	R	T	R	E	S	D	D	M	Y	I	M	.	.	.	.	.	.	.	.	.	G	R	D	K	A	H	A	S	D	E	F	N	L	A	G	A	T	Y	A	F	T	P	R	.	.	.	L	S	A	S	Y	Y	Y	G	Q	L	K	D	I
Template Known Secondary structure									S	T	T																			B		B	T	.	.	.	.	.	.	.	.	.	T	S		T	T	S		B	S											S	S	S	S	.	.	.											T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.										.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Q	N	D	D	G	T	Y	S	Q	Y	G	K	K	R	V	E	G	Y	E	I	S	V	A	G	N	I	T	P	A	W	Q	V	I	G	G	Y	T	Q	Q	K	A	T	I	K	N	G	K	D	V	A	Q	D	G	S	S	S	L	P	Y	T	P	E	H	A	F	T	L	W	S	Q	Y	Q	A	T	D	D	I	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	Q	H	Y	L	G	L	L	H	T	L	P	L	G	E	G	L	S	L	R	S	D	L	R	Y	F	D	S	G	E	D	G	A	A	I	S	G	P	V	D	N	.	.	.	.	.	.	.	.	R	N	L	N	A	M	L	T	L	R	A	.	G	A	H	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	T	T																T	T		T	T						.	.	.	.	.	.	.	.												.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.												.
Template SS confidence
																204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.	.	.	.	.		.	.	.	260
		677	.	.	680	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	G	A	R	Y	I	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	I	G	V	Q	K	M	I	G
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions