Job Description P08203 Confidence 100.00% Date Thu Jan 5 11:00:57 GMT 2012 Rank 4 Aligned Residues 209 % Identity 15% Template d1ojra_ SCOP info AraD/HMP-PK domain-like AraD/HMP-PK domain-like AraD-like aldolase/epimerase Resolution 1.35

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		D	L	K	R	Q	V	L	E	A	N	L	A	L	P	K	H	N	L	V	T	L	T	W	G	N	V	S	A	V	D	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	V	F	V	I	K	P	S	G	V	D	Y	S	V	M	T	A	D	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		W	F	V	Q	G	M	I	K	A	T	T	D	A	W	L	K	G	W	D	E	R	N	G	G	N	L	T	L	R	L	D	D	A	D	I	A	P	Y	H	D	N	F	H	Q	Q	P	R	Y	I	P	L	S	Q	P	M	P	L	L	A	N	T	P	F	I	V	T	G	S	G	K	F	F	R	N	V	Q	L	D	P	A
Template Known Secondary structure																		T				T	T														G	G	G	G	G	G	S		S	S							S	S			G	G	G	T	T							B	T	T			G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
					55	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110									.	.	.
Predicted Secondary structure		.	.	.													.	.	.	.	.																						.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.													.	.	.	.	.																						.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	D	M	V	V	V	S	I	E	T	G	E	V	.	.	.	.	.	V	E	G	T	K	K	P	S	S	D	T	P	T	H	R	L	L	Y	Q	A	F	.	.	.	.	.	P	S	I	G	G	I	V	H	T	H	S	R	H	A	T	I	W	A	Q	A	G	Q	S	.	.	.	.	.	.	.	.	I	P	A
Query Conservation		.	.	.													.	.	.	.	.																						.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence		.	.	.													.	.	.	.	.																						.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	L	G	I	V	K	V	D	S	D	G	A	G	Y	H	I	L	W	G	L	T	N	E	A	V	P	T	S	E	L	P	A	H	F	L	S	H	C	E	R	I	K	A	T	N	G	K	D	R	V	I	M	H	C	H	A	T	N	L	I	A	L	T	Y	V	L	E	N	D	T	A	V	F	T	R	Q	L	W	E
Template Known Secondary structure											T	T	S	S									T	T	T			B		T	T															T	T	T																	T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	T	T	H	A	D	Y	F	Y	G	T	I	P	C	T	R	K	M	T	D	A	E	I	N	G	E	Y	E	W	E	T	G	N	V	I	V	E	T	F	E	K	Q	G	I	D	A	A	Q	M	P	G	V	L	V	H	S	H	G	P	F	A	W	G	K	N	A	E	D	A	V	H	N	A	I	V	L	E	E	V
Query Conservation
Alig confidence																								.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		G	S	T	E	C	L	V	V	F	P	D	G	V	G	I	L	P	W	M	V	P	G	.	.	.	.	.	.	T	D	A	I	G	Q	A	T	A	Q	E	M	.	.	.	.	.	.	.	Q	K	H	S	L	V	L	W	P	F	H	G	V	F	G	S	G	P	T	L	D	E	T	F	G	L	I	D	T	A	E	K	S
Template Known Secondary structure		T	S	T	T						T	T										S	S	.	.	.	.	.	.	S												.	.	.	.	.	.	.	T	T		S					T	T	T							S	S
Template Predicted Secondary structure																								.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	M	G	I	F	C	R	Q	L	A	P	Q	L	P	D	M	Q	Q	T	L	L	D	K	H	Y	L	R	K	H	G	A	K
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		A	Q	V	L	V	K	V	Y	S	M	G	G	M	K	Q	T	I	S	R	E	E	L	I	A	.	L	G	K	R	F	G	V	T
Template Known Secondary structure											T	T			S	S										.						T
Template Predicted Secondary structure																										.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions