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Job Description | P08203 | Confidence | 3.21% | Date | Thu Jan 5 11:00:57 GMT 2012 |
Rank | 76 | Aligned Residues | 113 |
% Identity | 12% | Template | c2e37B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: structure of tt0471 protein from thermus thermophilus
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Resolution | 2.30 Å |
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41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | K | P | S | G | V | D | Y | S | V | M | T | A | D | D | M | V | V | V | S | I | E | T | G | E | V | V | E | G | T | K | K | P | S | S | D | T | P | T | H | R | L | L | Y | Q | A | F | P | S | I | G | G | I | V | H | T | H | S | R | H | A | T | I | W | A | Q | A | G | Q | S | I | P | A | T | G | T | T | H | A | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | W | V | R | A | G | S | Y | G | D | L | E | G | A | R | A | V | V | L | A | A | G | V | A | R | L | Q | L | L | D | R | N | A | Q | V | F | A | Q | V | V | P | R | V | L | E | A | A | P | E | A | V | L | L | V | A | T | N | P | V | D | V | X | T | Q | V | A | Y | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
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121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | F | Y | G | T | I | P | C | T | R | K | M | T | D | A | E | I | N | G | E | Y | E | W | E | T | G | N | V | I | V | E | T | F | E | K | Q | G | I | D | A | A | Q | M | P | G | V | L | V | H | S | H | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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R | L | S | G | L | P | P | G | R | V | V | G | S | G | T | I | L | D | T | A | R | F | R | A | L | L | A | E | Y | L | R | V | A | P | Q | S | V | H | A | Y | V | L | G | E | H | G |
Template Known Secondary structure |   |
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| G | G | G |  |  |  |  |  |  | B | S | S | S |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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