Job Description P08203 Confidence 7.66% Date Thu Jan 5 11:00:57 GMT 2012 Rank 21 Aligned Residues 118 % Identity 7% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		I	K	P	S	G	V	D	Y	S	V	M	T	A	D	D	M	V	V	V	S	I	E	T	G	E	V	V	E	G	T	K	K	P	S	S	D	T	P	T	H	R	L	L	Y	Q	.	.	.	.	.	.	.	.	.	A	F	P	S	I	G	G	I	V	H	T	H	S	R	H	A	T	I	W	A	Q	A	G	Q	S	I
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																								.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																						.	.																																																							.	.	.	.
Template Sequence		M	T	A	H	A	D	P	M	T	A	F	K	D	A	D	V	A	L	L	V	.	.	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	A	N	T	N	A	Y	I	A	M	.	.	.	.
Template Known Secondary structure						S						T	T	T		S						.	.							T	T																									S		T	T							S	S	S										.	.	.	.
Template Predicted Secondary structure																						.	.																																																							.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.				.	.	.	.	.	.	.
Predicted Secondary structure																																																							.									.	.	.
Query SS confidence																																																							.									.	.	.
Query Sequence		P	A	T	G	T	T	H	A	D	Y	F	Y	G	T	I	P	C	T	R	K	M	T	D	A	E	I	N	G	E	Y	E	W	E	T	G	N	V	I	V	E	T	F	E	K	Q	G	I	D	A	A	Q	M	P	.	G	V	L	V	H	S	H	G	.	.	.	P	F	A	W	G	K	N
Query Conservation																																																							.									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	A	P	S	L	P	A	K	N	F	T	A	M	L	R	L	D	H	N	R	A	L	S	Q	I	A	A	K	T	G	K	P	V	S	S	I	E	K	L	F	V	W	G	N	H	S	P	T	M	Y	A	D	Y	R	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T		T	T	S		G	G	G																					T			G	G	G			S					B		S	S	T	T						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions