Return to main results Retrieve Phyre Job Id

Job DescriptionP77519
Confidence11.33%DateThu Jan 5 12:30:12 GMT 2012
Rank12Aligned Residues56
% Identity14%Templated1uynx_
SCOP infoTransmembrane beta-barrels Autotransporter Autotransporter
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50 .........60.........70.........80....
Predicted Secondary structure 





.







Query SS confidence 





















.

































Query Sequence  GNKLDLYGKVTALRYFTDDKRD. DGDKTYARLGFKGETQINDQMIGFGHWEYDFKGY
Query Conservation     
  

              .      

 
 

   
   
 
    
      
Alig confidence 





















.

































Template Conservation                                  


         
    
       
Template Sequence  SDKAVLFATAGVERDLNGRDYTVTGPHTRLVAGLGADVEFGNGWNGLARYSYAGSKQ
Template Known Secondary structure  SSSSS









TTTT
Template Predicted Secondary structure 















Template SS confidence 
























































   997..1000.........1010.........1020.........1030.........1040.........1050...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions