Phyre 2 alignment of P68567 with c3i42A

Job Description P68567
Confidence 30.54% Date Thu Jan 5 12:11:03 GMT 2012

Rank 386 Aligned Residues 56

% Identity 20% Template c3i42A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey- PDBTitle: structure of response regulator receiver domain (chey-like)2 from methylobacillus flagellatus

Resolution 2.15 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence	R	V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L	Q	E	R	L	Q	L	I	H	A	S	S	L	T	A	L	T	D	I	T	.	P	R	P	Q	V	V	Y	L	D	P	M	F	P	H	K	Q
Query Conservation																																																				.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence	Q	A	L	I	V	E	D	Y	Q	A	A	A	E	T	F	K	E	L	L	E	M	L	G	F	Q	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	V	M	S	G	T	D	A	L	H	A	M	S	T	R	G	Y	D	A	V	F	I	D	L	N	L	P	D	T	S
Template Known Secondary structure							S															T	T			.	.	.	.	.	.	.	.	.	.	.					S	S											S			S						S	B		S	S	S	B
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions