Return to main results Retrieve Phyre Job Id

Job DescriptionP68567
Confidence98.61%DateThu Jan 5 12:11:03 GMT 2012
Rank52Aligned Residues84
% Identity17%Templatec3grrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of the complex between s-adenosyl homocysteine and2 methanocaldococcus jannaschi dim1.
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL
Query Conservation 
 
 

 


      








 

 


  
  
  




 

 

 


 

            

 
   

 
Alig confidence 












..








































...........












Template Conservation    

         .. 




 
 
 

  
      
 


 
      
     ...........      
   
 
Template Sequence  NKAVESANLTKDD. . VVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE. . . . . . . . . . . LYNNIEIIWGDAL
Template Known Secondary structure  TT

TT
..

TTSSSS
GGGT...........T
SSS
TT
Template Predicted Secondary structure 






..








...........






Template SS confidence 















































































   20.........30.. .......40.........50.........60.........70... ......80......
 
   156...160.... .....170....
Predicted Secondary structure 



.





Query SS confidence 








.









Query Sequence  TALTDITPR. PQVVYLDPMF
Query Conservation    
      . 








Alig confidence 

..




.









Template Conservation    ..         

 



Template Sequence  KV. . DLNKLDFNKVVANLPY
Template Known Secondary structure  TS..
GGG


S

G
Template Predicted Secondary structure 
..











Template SS confidence 



















   87. .90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions