 |
Job Description | P68567 | Confidence | 98.42% | Date | Thu Jan 5 12:11:03 GMT 2012 |
Rank | 83 | Aligned Residues | 88 |
% Identity | 16% | Template | c3cbgA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:o-methyltransferase; |
PDBTitle: functional and structural characterization of a2 cationdependent o-methyltransferase from the3 cyanobacterium synechocystis sp. strain pcc 6803
|
Resolution | 2.00 Å |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | E | A | V | A | K | A | V | G | I | K | G | D | Y | L | P | D | V | V | D | A | T | A | G | L | G | R | D | A | F | V | L | A | S | V | . |
. |
. |
G | C | R | V | R | M | L | E | R | N | P | V | V | A | A | L | L | D | D | G | L | A | R | G | Y | A | D | A | E | I | G | G | W | L | Q | E | R | L | Q | L | I |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   | . | . | . |
|   |   |
|   |   |
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |
|   |   |   |   |   |
|   | . | . |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|   |   |   |
Template Sequence |   |
Q | A | Q | F | L | G | L | L | I | S | L | T | G | A | K | . |
. |
Q | V | L | E | I | G | V | F | R | G | Y | S | A | L | A | M | A | L | Q | L | P | P | D | G | Q | I | I | A | C | D | Q | D | P | N | A | T | A | I | A | K | K | Y | W | Q | K | A | G | V | A | E | . |
. |
. |
. |
. |
. |
. |
. |
K | I | S | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
|
| . | . |  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  | T | T | S |
| T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | . | . | . | . | . | . | . | . | G |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
H | A | S | S | L | T | A | L | T | D | I | T | P | R | . |
. |
. |
. |
. |
P | Q | V | V | Y | L | D |
Query Conservation |   |
  |   |
|
|   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
Template Sequence |   |
L | G | P | A | L | A | T | L | E | Q | L | T | Q | G | K | P | L | P | E | F | D | L | I | F | I | D |
Template Known Secondary structure |   |
 | S |
|  |  |  |  |  |  |  |  |  | T | S | S | S |
|
|
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|