Job Description P68567 Confidence 99.24% Date Thu Jan 5 12:11:03 GMT 2012 Rank 9 Aligned Residues 150 % Identity 16% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	E	D	N	L	M	A	L	V	L	T	P	E	H	L	E	L	R	K	R	D	E	P	K	L	G	G	I	F	V	D	F	V	G	G	A	M	A	H	R	R	K	F	G	G	G	R	G	E	A	V	A	K	A	V	G	I	K	G	D	Y	L	P	D	V	V	D	A	T	A	G	L	G	R	D	A	F	V	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.								.	.	.	.	.	.	.																	.	.
Template Conservation																											.	.	.	.	.	.	.								.	.	.	.	.	.	.																	.	.
Template Sequence		T	G	E	L	P	P	A	L	L	P	I	E	E	H	G	X	K	L	L	V	D	I	Q	H	G	.	.	.	.	.	.	.	H	K	T	G	Y	Y	L	.	.	.	.	.	.	.	D	Q	R	D	S	R	L	A	T	R	R	Y	V	E	N	K	.	.	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A
Template Known Secondary structure			S					S	S						T	T							T	T	T	S	.	.	.	.	.	.	.	S	T	T	S	S		G	.	.	.	.	.	.	.	G	G												T	T		.	.						T		T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.								.	.	.	.	.	.	.																	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		107	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure							.																																																			.	.	.
Query SS confidence							.																																																			.	.	.
Query Sequence		A	S	V	G	C	.	R	V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L	Q	E	R	L	Q	L	I	H	A	S	S	L	T	A	L	T	D	I	.	.	.	T	P	R	P	Q	V	V	Y	L	D	P	M	F	P	H	K	Q	K	S	A	L
Query Conservation							.																																																			.	.	.
Alig confidence							.																											.	.	.	.	.	.	.																		.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		L	X	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	.	.	.	.	.	.	.	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L
Template Known Secondary structure				T	T		S							S															T	T			G	.	.	.	.	.	.	.	G	G						S												T	T											S	S		S	S	T	T		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	K	E	M	R	V	F	Q	S	L	V	G	P	D	L	D	A	D	G	L	L	E	P	A	R	L	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	G	.	.	.	.	.	.	.	.	.	.	.	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.	.			T												T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.												.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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