Job Description P68567 Confidence 34.00% Date Thu Jan 5 12:11:03 GMT 2012 Rank 371 Aligned Residues 89 % Identity 18% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		R	V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L	Q	E	R	L	Q	L	I	H	A	S	S	L	T	A	L	T	D	I	T	.	P	R	P	Q	V	V	Y	L	D	P	M	F	P	H	K	Q	K	S	A	L	V	K	K	E	M	R	V	F
Query Conservation																																																					.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																.															.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		K	I	L	V	V	D	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	G	Y	E	.	.	.	.	.	.	.	.	.	.	.	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	.	.	.	.	.	.	.	K	D	G	V	E	V	C
Template Known Secondary structure								S																T			.	.	.	.	.	.	.	.	.	.	.						S														S						T	T		S	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.												.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.
		191	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	L	.	.	.	.	.	.	.	.	.	V	G	P	D	L	D	A	D	G	L	L	E	P	A	R	L	L	A	T	K	R	V	V	V	K
Query Conservation					.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	V	R	K	K	Y	D	M	P	I	I	M	L	T	A	K	D	S	E	I	D	K	V	I	G	L	E	I	G	A	D	D	Y	V	T	K
Template Known Secondary structure										S								T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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