Job Description P68567 Confidence 98.86% Date Thu Jan 5 12:11:03 GMT 2012 Rank 31 Aligned Residues 118 % Identity 16% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	L	V	L	T	P	E	H	L	E	L	R	K	R	D	E	P	K	L	G	G	I	F	V	D	F	V	G	G	A	M	A	H	R	R	K	F	G	G	G	R	G	E	A	V	A	K	A	V	G	I	K	G	D	Y	L	P	D	V	V	D	A	T	A	G	L	G	R	D	A	F	V	L	A	S	V	G	C	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.																																	.	.
Template Conservation																		.	.	.	.	.	.	.	.																																	.	.
Template Sequence		I	E	R	F	W	G	K	E	F	I	R	E	R	L	D	D	.	.	.	.	.	.	.	.	V	D	Y	L	I	H	P	N	S	F	F	Q	T	N	S	Y	Q	A	V	N	L	V	R	K	V	S	E	L	V	E	G	E	.	.	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	G	F	N
Template Known Secondary structure									S							T	T	.	.	.	.	.	.	.	.							T	T	S				S	B																	S	S	.	.						T		T	T	T								T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L	Q	E	R	L	Q	L	I	H	A	S	S	L	T	A	L	T	D	I	T	P	R	P	Q	V	V	Y	L	D	P	M
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	.	.	.	.	.	.	.	.	.	A	E	F	E	V	A	S	D	.	.	.	.	R	E	V	S	V	K	G	F	D	T	V	I	V	D	P	P
Template Known Secondary structure							S															T	T			.	.	.	.	.	.	.	.	.								T	.	.	.	.	T	T				T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.										.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions