Job Description P68567 Confidence 57.40% Date Thu Jan 5 12:11:03 GMT 2012 Rank 333 Aligned Residues 99 % Identity 12% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		R	V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L	Q	E	R	L	Q	L	I	H	A	S	S	L	T	A	L	T	D	I	T	.	P	R	P	Q	V	V	Y	L	D	P	M	F	P	H	K	Q	K	S	A	L	V	K	K	E	M	R	V	F
Query Conservation																																																					.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																.																					.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		K	I	L	I	I	D	G	D	K	D	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	.	.	.	.	.	.	.	.	.	.	.	I	D	L	A	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	.	.	.	.	C	K	K	I
Template Known Secondary structure								S															T	T			.	.	.	.	.	.	.	.	.	.	.						S										T				S						S			T	T							.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30												.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70
		191	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		Q	S	L	V	G	P	.	.	.	.	.	.	D	L	D	A	D	G	L	L	E	P	A	R	L	L	A	T	K	R	V	V	V	K	R	P	D	Y	A	P	P	L
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																							.
Template Conservation																																				.
Template Sequence		R	N	V	T	T	C	P	I	V	Y	X	T	Y	I	N	E	D	Q	S	I	L	N	A	L	N	S	G	G	D	D	Y	L	I	K	.	P	L	N	L	E	I	L
Template Known Secondary structure							S							S													T	T		S					S	.	S
Template Predicted Secondary structure																																				.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions