Job Description P68567 Confidence 97.73% Date Thu Jan 5 12:11:03 GMT 2012 Rank 172 Aligned Residues 101 % Identity 19% Template c2qy6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0209 protein yfck; PDBTitle: crystal structure of the n-terminal domain of upf0209 protein yfck2 from escherichia coli o157:h7 Resolution 2.00 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.													110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Query Sequence		V	A	K	A	V	G	I	K	G	D	Y	L	P	D	V	V	D	A	T	A	G	L	G	R	D	A	F	V	L	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	G	C	R	.	.	V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation
Template Sequence		L	E	A	R	F	P	E	H	P	H	P	L	F	V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L	H	F	I	S	F	E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q	L
Template Known Secondary structure						G	G	G		S	S	S							S			T	T	S																		T	T	S	S											S	S												T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		144	.																		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	Q	L	I	H	A	S	S	L	T	A	L	T	D	I	T	P	R	.	.	.	.	P	Q	V	V	Y	L	D	P	M	F	P	H	K	Q
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		Q	A	Q	W	P	M	P	L	P	G	C	H	R	L	L	L	D	R	V	T	L	D	L	W	F	G	D	I	N	E	L	I	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W	F	L	D	G	F	A	P	A	K	N
Template Known Secondary structure				T				S		S																	S						G	G	G	S		G	G	G	T	T									S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions