Job Description P68567 Confidence 98.57% Date Thu Jan 5 12:11:03 GMT 2012 Rank 57 Aligned Residues 141 % Identity 16% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		G	E	A	V	A	K	A	V	G	I	K	G	D	Y	L	P	D	V	V	D	A	T	A	G	L	G	R	D	A	F	V	L	A	S	V	G	.	.	C	R	V	R	M	L	E	R	N	P	V	V	A	A	L	L	D	D	G	L	A	R	G	Y	A	D	A	E	I	G	G	W	L	Q	E	R	L	Q	L	I	H	A
Query Conservation																																						.	.
Alig confidence																.	.																					.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	L	L	L	S	T	L	T	P	H	T	K	G	.	.	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	.	.	.	.	.	.	.	.	.	.	G	E	V	F	A	S
Template Known Secondary structure									S		T	T			S	.	.	B			B	T	T		T	T	S											T	T		B						S	B														T	T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.											.	.	.	250	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		S	S	L	T	A	L	T	D	I	T	P	R	P	Q	V	V	Y	L	D	P	M	F	P	H	K	Q	K	S	A	L	V	K	K	E	M	R	V	F	Q	S	L	V	G	P	D	L	D	A	D	G	L	L	E	P	A	R	L	L	A	T	K	.	.	.	.	R	V	V	V	K	R	P	D	Y	A	P	P	L	A	N
Query Conservation																																																															.	.	.	.
Alig confidence						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	F	S	.	.	.	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D
Template Known Secondary structure		S	T	T	T	.	.	.	T			S													S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G													T	T	S	S
Template Predicted Secondary structure						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.																.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		229	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		V	A	.	T	P	N	A	V	V	T	K	G	H	R	F	D	I	Y
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y
Template Known Secondary structure					S									S	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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