|   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | H | D | E | D | N | L | M | A | L | V | L | T | P | E | H | . |
L | E | L | R | K | R | D | E | P | K | L | G | G | I | F | V | D | F | V | G | . |
. |
. |
G | A | M | A | H | R | R | K | F | G | G | G | R | G | E | A | V | A | K | A | V | G | I | . |
. |
. |
. |
K | G | D | Y | L | P | D | V | V | D | A | T |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   | . | . | . |
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |
|
| . | . | . | . |
|   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |
|
|   |
|   |   |
|
|
|   | . | . | . | . | . | . |
|
|
|   |   |   |
|
|
|   |
|
|   |   | . | . | . | . | . | . | . |
|
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
A | Y | N | P | E | E | S | G | Q | E | I | A | D | T | A | D | G | S | K | T | L | I | H | K | T | Y | G | E | P | . |
. |
. |
. |
. |
. |
Y | H | S | Q | T | A | G | A | I | R | E | S | L | Y | . |
. |
. |
. |
. |
. |
. |
K | F | V | R | P | S | R | I | L | E | K | A | K | E | R | K | V | I | R | I | L | D | V | G |
Template Known Secondary structure |   |
S |
|
| T | T |
|
|
|  |  |  |  |
|
| S | S | S |
|
|  |  |  |  | T | T | T | T |  |  | . | . | . | . | . | . | S | S |
| S | S | S |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  | T |  |  |  |  | T |  |  |  |  | T | T | S |
| S |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | L | G | R | D | A | F | V | L | A | . |
. |
. |
. |
. |
. |
S | V | G | C | R | V | R | M | L | E | R | N | P | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | A | A | L | L | D | D | G | L | A | R | G | Y | A | D | A | E | I | G | G | W | L | Q | E | R | L | Q | L | I | H | A | S | S | L | T | A | L | T |
Query Conservation |   |
|
|
|
|   |
|
|   |
|
|
| . | . | . | . | . | . |   |   |
|   |   |
|   |   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
| . | . | . | . |   |
|   |
|   |   |
|
|
|
|   |   |
|   |
Template Sequence |   |
F | G | L | G | Y | N | L | A | V | A | L | K | H | L | W | E | V | N | P | K | L | R | V | E | I | I | S | F | E | K | E | L | L | K | E | F | P | I | L | P | E | P | Y | R | E | I | H | E | F | L | L | E | R | V | P | E | Y | E | G | E | R | L | . |
. |
. |
. |
S | L | K | V | L | L | G | D | A | R | K | R | I | K |
Template Known Secondary structure |   |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  | S | S |
|
| S |
|
|
|
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |
| S | S |  | . | . | . | . |  |  |  |  |  |  | S |
|  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
  |   |
160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | T | P | . |
R | P | Q | V | V | Y | L | D | P | M | F | P | H | K | Q |
Query Conservation |   |
  |   |   |   | . |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
E | V | E | N | F | K | A | D | A | V | F | H | D | A | F | S | P | Y | K | N |
Template Known Secondary structure |   |
T |
|
| S |
|
|  |  |  |  |  |  |
|
| S |
| T | T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
  |