Job Description P76347 Confidence 89.37% Date Wed Jan 25 15:21:07 GMT 2012 Rank 50 Aligned Residues 151 % Identity 17% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		221	.	.	.	.	.	.	.	.	230	.	.	.	.						.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																.	.	.	.	.																													.	.	.	.
Query SS confidence																.	.	.	.	.																													.	.	.	.
Query Sequence		Q	H	T	L	H	R	T	D	E	R	T	Q	I	N	.	.	.	.	.	N	G	L	G	W	R	H	F	T	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	.	.	.	.	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	L	S	S	N	G	Y	L	R	L	T	N	W	R	S
Query Conservation																.	.	.	.	.																													.	.	.	.
Alig confidence																.	.	.	.	.																													.	.	.	.																							.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		G	Y	A	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	A	K	L	S	G	L	L	Q	Q	.	.	.	.	.	.	T
Template Known Secondary structure							T	T			B	T	T	B	S	S	T	T												S	S															T	T																	S	S										.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G	W	D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	.
Query Conservation																																																																																	.
Alig confidence							.																				.	.														.	.	.	.	.	.	.	.																																.
Template Conservation							.																				.	.														.	.	.	.	.	.	.	.
Template Sequence		K	F	K	R	D	.	I	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	.	.	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	.	.	.	.	.	.	.	.	Q	K	A	I	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y	G	N	L	A	F	L
Template Known Secondary structure						T	.	T	S																	T	.	.	T	T												.	.	.	.	.	.	.	.		G	G	G	T														S	S	S	S
Template Predicted Secondary structure							.																				.	.														.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.									.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
																					371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Q	G	E	N	D	T	R	F	A	V	D	F	T	W	Q	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure					T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions