Job Description P76347 Confidence 96.43% Date Wed Jan 25 15:21:07 GMT 2012 Rank 21 Aligned Residues 166 % Identity 13% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	H	T	L	H	R	T	D	E	R	T	Q	I	N	N	G	L	G	W	R	H	F	T	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	L	S	S	N	G	Y	L	R	L	T	N	W	R	S	A	P	E	L	D	N	D	Y
Query Conservation
Alig confidence																							.												.	.	.	.	.	.	.
Template Conservation																							.												.	.	.	.	.	.	.
Template Sequence		K	I	A	H	L	N	G	N	Q	W	G	F	G	W	N	A	G	I	L	Y	E	.	L	D	K	N	N	R	Y	A	L	T	Y	.	.	.	.	.	.	.	R	S	E	V	K	I	D	F	K	G	N	Y	S	S	D	L	N	R	A	F	N	N	Y	G	L	P	I	P	T	A	T	G	G	A	T	Q	S	G	Y	L
Template Known Secondary structure																							.			T	T								.	.	.	.	.	.	.																S		G	G	G	T	T	S			S	S					T	T
Template Predicted Secondary structure																							.												.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.										.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		E	A	R	P	A	N	G	W	D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	.	.	.	.	.	.	.	.	.	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	N	L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F
Template Known Secondary structure																			T	T												G	G	G									T	T	S																									S	S	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		371	.	.													.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	G	E	N	D	T	R	F	A	V	D	F	T	W	Q	P	G	S	A	M	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	S	P	V	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S
Template Known Secondary structure					S	S		T	T	T			S	S	S																S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions